From 049ebe23ee35f36e20cf2c99db648a33fe5289bf Mon Sep 17 00:00:00 2001 From: LouisK92 <37270609+LouisK92@users.noreply.github.com> Date: Sat, 26 Aug 2023 00:12:37 +0200 Subject: [PATCH] Mention python package in docs --- docs/index.rst | 2 +- spapros/selection/selection_procedure.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/index.rst b/docs/index.rst index 0753228..8f6868d 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -35,7 +35,7 @@ Welcome to spapros's documentation! |logo| -**Spapros** provides a pipeline for probe set selection and evaluation for targeted spatial transcriptomics data. +**Spapros** is a python package that provides a pipeline for probe set selection and evaluation for targeted spatial transcriptomics data. Key Features ------------- diff --git a/spapros/selection/selection_procedure.py b/spapros/selection/selection_procedure.py index 78000d0..62d829c 100644 --- a/spapros/selection/selection_procedure.py +++ b/spapros/selection/selection_procedure.py @@ -1679,7 +1679,7 @@ def plot_coexpression( def plot_clf_genes( self, - basis: int = "X_umap", + basis: str = "X_umap", celltypes: Optional[List[str]] = None, till_rank: Optional[int] = 1, importance_th: Optional[float] = None,