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Improve input flexibility for kBET #69

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mbuttner opened this issue Apr 29, 2022 · 0 comments
Open
4 tasks

Improve input flexibility for kBET #69

mbuttner opened this issue Apr 29, 2022 · 0 comments

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@mbuttner
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mbuttner commented Apr 29, 2022

kBET requires a dense matrix as input, even if kBET will only use a knn graph.

  • Include sparse matrix computation
  • Remove requirement of data matrix when a knn graph is provided
  • Use sparse matrix structure for knn graph
  • allow SCE objects as input
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