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Your observation is correct. But, that is the exact reason we have two different approaches. Terrascan being a static code analyzer tries it's best to resolve terraform references, but there's a possibility that some of those references remain unresolved.
So the workaround for this is to use the terraform plan JSON which has all the values resolved with terrascan.
As you see there is a difference between the two approaches and hence the results.
Description
I ran terrascan using remote VPC module
No problems were found, however there should be something. When generated plan file and converted to JSON, then scan resulted in some warnings.
What I Did
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