csv-batcher
+
A python-based, multiprocess CSV batcher suitable for
+use with dataframes or other tools that deal with large CSV files (or those that require timely processing).
+
Installation
-
TBD (python package)
-pip install csv-batcher
+
pip install csv-batcher
+
+
GitHub
Documentation
diff --git a/docs/search.js b/docs/search.js
index 51207bf..5491344 100644
--- a/docs/search.js
+++ b/docs/search.js
@@ -1,6 +1,6 @@
window.pdocSearch = (function(){
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\n\nTBD (python package)\npip install csv-batcher
\n\nDocumentation
\n\nhttps://tangledpath.github.io/csv-batcher/csv_batcher.html
\n\nUsage
\n\nArguments sent to callback function can be controlled by\ncreating pooler with callback_with
and the CallbackWith enum\nvalues:
\n\nAs dataframe row
\n\n\n
from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n # Callback function passed to pooler; accepts a dataframe row\n # as a pandas Series (via apply)\n def process_dataframe_row(row):\n return row.iloc[0]\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe_row,\n callback_with=CallbackWith.DATAFRAME_ROW,\n pool_size=16\n )\n pooler.process()\n\n### As dataframe\n```python\n from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n # Used in DataFrame.apply:\n def process_dataframe_row(row):\n return row.iloc[0]\n\n # Callback function passed to pooler; accepts a dataframe:\n def process_dataframe(df):\n foo = df.apply(process_dataframe_row, axis=1)\n # Or do something more complicated....\n return len(df)\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe,\n callback_with=CallbackWith.DATAFRAME,\n pool_size=16\n )\n pooler.process()\n\n### As CSV filename\n```python\n from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n def process_csv_filename(csv_chunk_filename):\n # print("processing ", csv_chunk_filename)\n df = pd.read_csv(csv_chunk_filename, skipinitialspace=True, index_col=None)\n foo = df.apply(process_dataframe_row, axis=1)\n return len(df)\n\n def process_as_dataframe(df):\n foo = df.apply(process_dataframe_row, axis=1)\n return len(df)\n\n def process_dataframe_row(row):\n return row.iloc[0]\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe,\n callback_with=CallbackWith.CSV_FILENAME\n chunk_lines=10000,\n pool_size=16\n )\n pooler.process()\n
\n
\n\nDevelopment
\n\nLinting
\n\n\n
ruff check . # Find linting errors\n ruff check . --fix # Auto-fix linting errors (where possible)\n
\n
\n\nDocumentation
\n\n # Shows in browser\n poetry run pdoc csv_batcher\n # Generates to ./docs\n poetry run pdoc csv_batcher -o ./docs\n
\n\nTesting
\n\n\n\nPublishing
\n\npoetry publish --build -u __token__ -p $PYPI_TOKEN
\n"}, "csv_batcher.csv_pooler": {"fullname": "csv_batcher.csv_pooler", "modulename": "csv_batcher.csv_pooler", "kind": "module", "doc": "\n"}, "csv_batcher.csv_pooler.CallbackWith": {"fullname": "csv_batcher.csv_pooler.CallbackWith", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith", "kind": "class", "doc": "CallbackWith Enum, used to control what is passed to callback function
\n", "bases": "enum.StrEnum"}, "csv_batcher.csv_pooler.CallbackWith.CSV_FILENAME": {"fullname": "csv_batcher.csv_pooler.CallbackWith.CSV_FILENAME", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.CSV_FILENAME", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.CSV_FILENAME: 'csv_filename'>"}, "csv_batcher.csv_pooler.CallbackWith.DATAFRAME": {"fullname": "csv_batcher.csv_pooler.CallbackWith.DATAFRAME", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.DATAFRAME", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.DATAFRAME: 'dataframe'>"}, "csv_batcher.csv_pooler.CallbackWith.DATAFRAME_ROW": {"fullname": "csv_batcher.csv_pooler.CallbackWith.DATAFRAME_ROW", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.DATAFRAME_ROW", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.DATAFRAME_ROW: 'dataframe_row'>"}, "csv_batcher.csv_pooler.CSVPooler": {"fullname": "csv_batcher.csv_pooler.CSVPooler", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler", "kind": "class", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.__init__": {"fullname": "csv_batcher.csv_pooler.CSVPooler.__init__", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.__init__", "kind": "function", "doc": "Construct Pooler
with given csv_filename
, process_fn
, as_dataframe
, `pool_size', 'chunk_size'
\n\nArgs:\n csv_filename (str): Name of CSV file\n process_fn (Callable): A function that accepts a single argument\n By default, this is the path to a chunked CSV file\n If as_dataframe
is True, then the argument sent is a dataframe of the chunked CSV\n callback_with (CallbackWith): Controls what is sent to callback function.\n @see CallbackWith enumeration for details\n Defaults to CallbackWith.CSV_FILENAME.\n as_dataframe_rows (bool): When True, a dataframe is created as with as_dataframe.\n that is sent to process_fn
instead. Defaults to False.\n pool_size (int, optional): Number of workers to uses. Defaults to 8.\n chunk_lines (int, optional): Target row count for each chunked CSV. Last chunk may\n have fewer rows. Defaults to 10000.
\n", "signature": "(\tcsv_filename: str,\tprocess_fn: Callable,\tcallback_with: csv_batcher.csv_pooler.CallbackWith = <CallbackWith.CSV_FILENAME: 'csv_filename'>,\tpool_size: int = 5,\tchunk_lines: int = 10000)"}, "csv_batcher.csv_pooler.CSVPooler.csv_filename": {"fullname": "csv_batcher.csv_pooler.CSVPooler.csv_filename", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.csv_filename", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.process_fn": {"fullname": "csv_batcher.csv_pooler.CSVPooler.process_fn", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.process_fn", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.callback_with": {"fullname": "csv_batcher.csv_pooler.CSVPooler.callback_with", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.callback_with", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.pool_size": {"fullname": "csv_batcher.csv_pooler.CSVPooler.pool_size", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.pool_size", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.chunk_lines": {"fullname": "csv_batcher.csv_pooler.CSVPooler.chunk_lines", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.chunk_lines", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.process": {"fullname": "csv_batcher.csv_pooler.CSVPooler.process", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.process", "kind": "function", "doc": "Processes self.csv_filename
by using CSVSplitter
to split it\n into multiple temporary files defined by self.chunk_lines
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to use multiple process workers to process\nthe group of CSVs.
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\n"}, "csv_batcher.csv_splitter.CSVSplitter.__init__": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.__init__", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.__init__", "kind": "function", "doc": "Construct CSVSplitter
\n\nArgs:\n csv_filename (str): path to CSV file\n chunk_line_cnt (int, optional): Target lines for each chunk. Last chunk might\n be smaller than this. Defaults to 10000.
\n", "signature": "(csv_filename: str, chunk_line_cnt: int = 10000)"}, "csv_batcher.csv_splitter.CSVSplitter.csv_filename": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.csv_filename", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.csv_filename", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_splitter.CSVSplitter.chunk_line_cnt": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.chunk_line_cnt", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.chunk_line_cnt", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_splitter.CSVSplitter.chunk_dir": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.chunk_dir", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.chunk_dir", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_splitter.CSVSplitter.chunk_files": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.chunk_files", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.chunk_files", "kind": "variable", "doc": "\n"}, "csv_batcher.csv_splitter.CSVSplitter.csv_files": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.csv_files", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.csv_files", "kind": "function", "doc": "Returns self.chunk_files
\n", "signature": "(self):", "funcdef": "def"}, "csv_batcher.csv_splitter.CSVSplitter.cleanup": {"fullname": "csv_batcher.csv_splitter.CSVSplitter.cleanup", "modulename": "csv_batcher.csv_splitter", "qualname": "CSVSplitter.cleanup", "kind": "function", "doc": "Remove temporary directory for chunk files; this must be called\nand should be called in a finally
block
\n", "signature": "(self):", "funcdef": "def"}, "csv_batcher.test_csv_pooler": {"fullname": "csv_batcher.test_csv_pooler", "modulename": "csv_batcher.test_csv_pooler", "kind": "module", "doc": "\n"}, "csv_batcher.test_csv_pooler.test_big_file_as_csv": {"fullname": "csv_batcher.test_csv_pooler.test_big_file_as_csv", "modulename": "csv_batcher.test_csv_pooler", "qualname": "test_big_file_as_csv", "kind": "function", "doc": "\n", "signature": "():", "funcdef": "def"}, "csv_batcher.test_csv_pooler.test_big_file_as_dataframe": {"fullname": "csv_batcher.test_csv_pooler.test_big_file_as_dataframe", "modulename": "csv_batcher.test_csv_pooler", "qualname": "test_big_file_as_dataframe", "kind": "function", "doc": "\n", "signature": "():", "funcdef": "def"}, "csv_batcher.test_csv_pooler.test_big_file_as_dataframe_rows": {"fullname": "csv_batcher.test_csv_pooler.test_big_file_as_dataframe_rows", "modulename": "csv_batcher.test_csv_pooler", "qualname": "test_big_file_as_dataframe_rows", "kind": 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+ /** pdoc search index */const docs = {"version": "0.9.5", "fields": ["qualname", "fullname", "annotation", "default_value", "signature", "bases", "doc"], "ref": "fullname", "documentStore": {"docs": {"csv_batcher": {"fullname": "csv_batcher", "modulename": "csv_batcher", "kind": "module", "doc": "csv-batcher
\n\nA python-based, multiprocess CSV batcher suitable for\nuse with dataframes or other tools that deal with large CSV files (or those that require timely processing).
\n\nInstallation
\n\npip install csv-batcher
\n\nGitHub
\n\nDocumentation
\n\nhttps://tangledpath.github.io/csv-batcher/csv_batcher.html
\n\nUsage
\n\nArguments sent to callback function can be controlled by\ncreating pooler with callback_with
and the CallbackWith enum\nvalues:
\n\nAs dataframe row
\n\n\n
from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n # Callback function passed to pooler; accepts a dataframe row\n # as a pandas Series (via apply)\n def process_dataframe_row(row):\n return row.iloc[0]\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe_row,\n callback_with=CallbackWith.DATAFRAME_ROW,\n pool_size=16\n )\n pooler.process()\n\n### As dataframe\n```python\n from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n # Used in DataFrame.apply:\n def process_dataframe_row(row):\n return row.iloc[0]\n\n # Callback function passed to pooler; accepts a dataframe:\n def process_dataframe(df):\n foo = df.apply(process_dataframe_row, axis=1)\n # Or do something more complicated....\n return len(df)\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe,\n callback_with=CallbackWith.DATAFRAME,\n pool_size=16\n )\n pooler.process()\n\n### As CSV filename\n```python\n from csv_batcher.csv_pooler import CSVPooler, CallbackWith\n\n def process_csv_filename(csv_chunk_filename):\n # print("processing ", csv_chunk_filename)\n df = pd.read_csv(csv_chunk_filename, skipinitialspace=True, index_col=None)\n foo = df.apply(process_dataframe_row, axis=1)\n return len(df)\n\n def process_as_dataframe(df):\n foo = df.apply(process_dataframe_row, axis=1)\n return len(df)\n\n def process_dataframe_row(row):\n return row.iloc[0]\n\n pooler = CSVPooler(\n "5mSalesRecords.csv",\n process_dataframe,\n callback_with=CallbackWith.CSV_FILENAME\n chunk_lines=10000,\n pool_size=16\n )\n pooler.process()\n
\n
\n\nDevelopment
\n\nLinting
\n\n\n
ruff check . # Find linting errors\n ruff check . --fix # Auto-fix linting errors (where possible)\n
\n
\n\nDocumentation
\n\n # Shows in browser\n poetry run pdoc csv_batcher\n # Generates to ./docs\n poetry run pdoc csv_batcher -o ./docs\n
\n\nTesting
\n\n\n\nPublishing
\n\npoetry publish --build -u __token__ -p $PYPI_TOKEN
\n"}, "csv_batcher.csv_pooler": {"fullname": "csv_batcher.csv_pooler", "modulename": "csv_batcher.csv_pooler", "kind": "module", "doc": "\n"}, "csv_batcher.csv_pooler.CallbackWith": {"fullname": "csv_batcher.csv_pooler.CallbackWith", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith", "kind": "class", "doc": "CallbackWith Enum, used to control what is passed to callback function
\n", "bases": "enum.StrEnum"}, "csv_batcher.csv_pooler.CallbackWith.CSV_FILENAME": {"fullname": "csv_batcher.csv_pooler.CallbackWith.CSV_FILENAME", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.CSV_FILENAME", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.CSV_FILENAME: 'csv_filename'>"}, "csv_batcher.csv_pooler.CallbackWith.DATAFRAME": {"fullname": "csv_batcher.csv_pooler.CallbackWith.DATAFRAME", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.DATAFRAME", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.DATAFRAME: 'dataframe'>"}, "csv_batcher.csv_pooler.CallbackWith.DATAFRAME_ROW": {"fullname": "csv_batcher.csv_pooler.CallbackWith.DATAFRAME_ROW", "modulename": "csv_batcher.csv_pooler", "qualname": "CallbackWith.DATAFRAME_ROW", "kind": "variable", "doc": "\n", "default_value": "<CallbackWith.DATAFRAME_ROW: 'dataframe_row'>"}, "csv_batcher.csv_pooler.CSVPooler": {"fullname": "csv_batcher.csv_pooler.CSVPooler", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler", "kind": "class", "doc": "\n"}, "csv_batcher.csv_pooler.CSVPooler.__init__": {"fullname": "csv_batcher.csv_pooler.CSVPooler.__init__", "modulename": "csv_batcher.csv_pooler", "qualname": "CSVPooler.__init__", "kind": "function", "doc": "Construct Pooler
with given csv_filename
, process_fn
, as_dataframe
, `pool_size', 'chunk_size'
\n\nArgs:\n csv_filename (str): Name of CSV file\n process_fn (Callable): A function that accepts a single argument\n By default, this is the path to a chunked CSV file\n If as_dataframe
is True, then the argument sent is a dataframe of the chunked CSV\n callback_with (CallbackWith): Controls what is sent to callback function.\n @see CallbackWith enumeration for details\n Defaults to CallbackWith.CSV_FILENAME.\n as_dataframe_rows (bool): When True, a dataframe is created as with as_dataframe.\n that is sent to process_fn
instead. Defaults to False.\n pool_size (int, optional): Number of workers to uses. Defaults to 8.\n chunk_lines (int, optional): Target row count for each chunked CSV. Last chunk may\n have fewer rows. Defaults to 10000.
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// mirrored in build-search-index.js (part 1)
// Also split on html tags. this is a cheap heuristic, but good enough.
diff --git a/pyproject.toml b/pyproject.toml
index 6ce01e4..955e1e0 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,7 +1,7 @@
[tool.poetry]
name = "csv-batcher"
-version = "0.1.2"
-description = "A utility to split a large CSV into smaller ones, and uses multiprocessing to process the CSVs in parallel."
+version = "0.1.3"
+description = "A python utility to split a large CSV into smaller ones, and uses multiprocessing to process the CSVs in parallel."
authors = ["Steven Miers "]
readme = "README.md"
license = "The Unlicense"