diff --git a/src/Command/CodeCheckerCommand.php b/src/Command/CodeCheckerCommand.php
index bc153c62..b3dd72e1 100644
--- a/src/Command/CodeCheckerCommand.php
+++ b/src/Command/CodeCheckerCommand.php
@@ -79,6 +79,15 @@ protected function execute(InputInterface $input, OutputInterface $output): int
         // @codeCoverageIgnoreEnd
 
         $exclude = $input->getOption('exclude');
+
+        // There are some differences in the checks performed when the code to
+        // check is a plugin or a Moodle core directory. And, here, we are always
+        // checking a plugin, so we need to exclude some checks that are not
+        // applicable.
+        // TODO: If https://github.com/moodlehq/moodle-cs/issues/92 becomes implemented, then
+        // we'll just have to change to the new, plugins specific, standard and forget.
+        $exclude .= (!empty($exclude) ? ',' : '') . 'moodle.Commenting.TodoComment';
+
         $cmd     = array_merge($basicCMD, [
             '--standard=' . ($input->getOption('standard') ?: 'moodle'),
             '--extensions=php',
diff --git a/tests/Fixture/moodle-local_ci/lib.php b/tests/Fixture/moodle-local_ci/lib.php
index 5312d695..ae928c1c 100644
--- a/tests/Fixture/moodle-local_ci/lib.php
+++ b/tests/Fixture/moodle-local_ci/lib.php
@@ -22,6 +22,9 @@
  * @license   http://www.gnu.org/copyleft/gpl.html GNU GPL v3 or later
  */
 
+// TODO: This todo comment without any MDL link is good for moodle-plugin-ci
+// (because we disable the moodle.Commenting.TodoComment sniff for plugins).
+
 /**
  * Add
  *