diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index fa2f41ce..b5565e47 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -77,6 +77,24 @@ poetry run python poetry run datadoc ``` +## Config for local development + +We use a python package called `python-dotenv` for configuration management. This gives two possibilities for sourcing configuration: + +1. Environment variables. +1. A file called `.env` by convention. + +To set up for local development run this command from the root of the repo. + +1. Create a file `src/datadoc/.env` +1. Place the following lines in the file: +``` +DATADOC_DASH_DEVELOPMENT_MODE=True +DATADOC_LOG_LEVEL=debug +``` + +To see all configuration options, see `src/datadoc/config.py` + ## How to test the project Run the full test suite: diff --git a/poetry.lock b/poetry.lock index 3b0920b5..9e96c31c 100644 --- a/poetry.lock +++ b/poetry.lock @@ -709,13 +709,13 @@ test-randomorder = ["pytest-randomly"] [[package]] name = "dapla-toolbelt" -version = "2.0.3" -description = "Dapla Toolbelt" +version = "1.8.6" +description = "Python module for use within Jupyterlab notebooks, specifically aimed for Statistics Norway's data platform called Dapla" optional = false python-versions = ">=3.10,<4.0" files = [ - {file = "dapla_toolbelt-2.0.3-py3-none-any.whl", hash = "sha256:9041cec86cc3dba409e6f05d22241f00db9f57bfff49d54a89e4b0d9f3a8c9c9"}, - {file = "dapla_toolbelt-2.0.3.tar.gz", hash = "sha256:af25e358f494cd786037dd34814caa456e44d481b427bcdafdc634ef41a39251"}, + {file = 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NOT SUITABLE FOR PRODUCTION.") + app.run(debug=dev_mode, port=port) if __name__ == "__main__": diff --git a/src/datadoc/backend/dapla_dataset_path_info.py b/src/datadoc/backend/dapla_dataset_path_info.py index 63545655..6fe18aa0 100644 --- a/src/datadoc/backend/dapla_dataset_path_info.py +++ b/src/datadoc/backend/dapla_dataset_path_info.py @@ -1,7 +1,6 @@ """Extract info from a path following SSB's dataset naming convention.""" from __future__ import annotations -import contextlib import pathlib import re from dataclasses import dataclass @@ -12,6 +11,7 @@ if TYPE_CHECKING: import datetime + import os @dataclass @@ -262,16 +262,11 @@ def convert_ssb_period( class DaplaDatasetPathInfo: """Extract info from a path following SSB's dataset naming convention.""" - def __init__(self, dataset_path: str) -> None: + def __init__(self, dataset_path: str | os.PathLike[str]) -> None: """Digest the path so that it's ready for further parsing.""" self.dataset_path = pathlib.Path(dataset_path) self.dataset_name_sections = self.dataset_path.stem.split("_") - _period_strings = self._extract_period_strings(self.dataset_name_sections) - self.first_period_string = _period_strings[0] - self.second_period_string: str | None = None - - with contextlib.suppress(IndexError): - self.second_period_string = _period_strings[1] + self._period_strings = self._extract_period_strings(self.dataset_name_sections) @staticmethod def _extract_period_strings(dataset_name_sections: list[str]) -> list[str]: @@ -306,28 +301,40 @@ def _extract_period_strings(dataset_name_sections: list[str]) -> list[str]: ] @property - def contains_data_from(self) -> datetime.date: + def contains_data_from(self) -> datetime.date | None: """The earliest date from which data in the dataset is relevant for.""" - date_format = categorize_period_string(self.first_period_string) + try: + period_string = self._period_strings[0] + date_format = categorize_period_string(period_string) + except IndexError: + return None + if isinstance(date_format, SsbDateFormat): """If dateformat is SSB date format return start month of ssb period.""" period = convert_ssb_period( - self.first_period_string, + period_string, "start", date_format, ) return arrow.get(period, date_format.arrow_pattern).floor("month").date() return ( - arrow.get(self.first_period_string, date_format.arrow_pattern) + arrow.get(period_string, date_format.arrow_pattern) .floor(date_format.timeframe) .date() ) @property - def contains_data_until(self) -> datetime.date: + def contains_data_until(self) -> datetime.date | None: """The latest date until which data in the dataset is relevant for.""" - period_string = self.second_period_string or self.first_period_string + try: + period_string = self._period_strings[1] + except IndexError: + try: + period_string = self._period_strings[0] + except IndexError: + return None + date_format = categorize_period_string(period_string) if isinstance(date_format, SsbDateFormat): """If dateformat is SSB date format return end month of ssb period.""" diff --git a/src/datadoc/backend/datadoc_metadata.py b/src/datadoc/backend/datadoc_metadata.py index 2b255396..86c7ed83 100644 --- a/src/datadoc/backend/datadoc_metadata.py +++ b/src/datadoc/backend/datadoc_metadata.py @@ -11,6 +11,7 @@ from datadoc_model import model from datadoc import config +from datadoc.backend.dapla_dataset_path_info import DaplaDatasetPathInfo from datadoc.backend.dataset_parser import DatasetParser from datadoc.backend.model_backwards_compatibility import upgrade_metadata from datadoc.backend.storage_adapter import StorageAdapter @@ -214,10 +215,14 @@ def extract_metadata_from_dataset( """ self.ds_schema: DatasetParser = DatasetParser.for_file(dataset) + dapla_dataset_path_info = DaplaDatasetPathInfo(dataset) + self.meta.dataset = model.Dataset( short_name=self.short_name, dataset_state=self.dataset_state, version=self.get_dataset_version(short_name), + contains_data_from=str(dapla_dataset_path_info.contains_data_from), + contains_data_until=str(dapla_dataset_path_info.contains_data_until), data_source_path=self.dataset, created_by=self.current_user, ) diff --git a/tests/backend/test_dapla_dataset_path_info.py b/tests/backend/test_dapla_dataset_path_info.py index d46ee9b4..7a53af1d 100644 --- a/tests/backend/test_dapla_dataset_path_info.py +++ b/tests/backend/test_dapla_dataset_path_info.py @@ -4,6 +4,7 @@ import pytest from datadoc.backend.dapla_dataset_path_info import DaplaDatasetPathInfo +from tests.utils import TEST_PARQUET_FILEPATH @dataclass @@ -136,16 +137,32 @@ def test_extract_period_info_date_until( assert dataset_path.contains_data_until == expected_contains_data_until -# Nonsens names, no dates path names will trigger IndexError +@pytest.mark.parametrize( + "data", + [ + ( + "varehandel_p2018Q5_p2018Q4_v1.parquet", + "Period format p2018Q5 is not supported", + ), + ( + "varehandel_p2018Q1_p2018H2_v1.parquet", + "Period format p2018H2 is not supported", + ), + ], +) +def test_extract_period_info_failures(data: tuple): + DaplaDatasetPathInfo(data[0]) + with pytest.raises(NotImplementedError): + raise NotImplementedError(data[1]) + + @pytest.mark.parametrize( "data", [ "nonsen.data", "nonsens2.parquet", - "nonsens_v1.parquet", - "varehandel_v1.parquet", + TEST_PARQUET_FILEPATH.name, ], ) -def test_extract_period_info_failures_index_error(data: str): - with pytest.raises(IndexError): - DaplaDatasetPathInfo(data) +def test_extract_period_info_no_period_info_in_path(data: str): + assert DaplaDatasetPathInfo(data).contains_data_from is None diff --git a/tests/backend/test_datadoc_metadata.py b/tests/backend/test_datadoc_metadata.py index 3e13c183..66bcb0bd 100644 --- a/tests/backend/test_datadoc_metadata.py +++ b/tests/backend/test_datadoc_metadata.py @@ -200,7 +200,6 @@ def test_direct_person_identifying_default_value(metadata: DataDocMetadata): assert all(not v.direct_person_identifying for v in metadata.meta.variables) -# Test with existing dataset and metadata document def test_save_file_path_metadata_field( existing_metadata_file: str, metadata: DataDocMetadata, @@ -211,7 +210,6 @@ def test_save_file_path_metadata_field( assert saved_file_path == str(metadata.dataset) -# Test with dataset and no metadata document def test_save_file_path_dataset_and_no_metadata( metadata: DataDocMetadata, ): @@ -219,6 +217,3 @@ def test_save_file_path_dataset_and_no_metadata( with Path.open(Path(TEST_RESOURCES_METADATA_DOCUMENT)) as f: saved_file_path = json.load(f)["datadoc"]["dataset"]["file_path"] assert saved_file_path == str(metadata.dataset) - - -# Test with metadata document and no dataset