Skip to content

Commit

Permalink
updated sassy readme
Browse files Browse the repository at this point in the history
  • Loading branch information
adw96 committed Feb 7, 2024
1 parent 1bb2313 commit fc72355
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ If you are a **microbial ecologist** or **bioinformatician**, some of the things
- Instead, `radEmu` estimates differences in abundance across taxa
- Amongst existing methods, `radEmu` is *most similar in flavor* to ALDEx2 and ANCOM (and ANCOM relatives), but doesn't require priors, log-ratio transformations (and thus pseudocounts), nor a reference taxon!
- `radEmu` can adjust for relevant covariates, including precision variables and confounders
- `radEmu` achieves all of the above by jointly modeling all taxa (i.e., it's not a taxon-by-taxon model like corncob). This makes it harder to parallelize, but fortunately *testing* can be parallelized easily. (There's is an example in the preprint's [supplementary material](https://github.com/statdivlab/radEmu_supplementary), but let us know if you want a tutorial on *how*!) On a standard desktop, `radEmu` can handle 1000 taxa, 800 samples and 12 covariates. You may want to get a coffee while it runs, though.
- `radEmu` achieves all of the above by jointly modeling all taxa (i.e., it's not a taxon-by-taxon model like corncob). This makes it harder to parallelize, but fortunately *testing* can be parallelized easily. (There's is an example in the preprint's [supplementary material](https://github.com/statdivlab/radEmu_supplementary), but let us know if you want a tutorial on *how*!) On a standard desktop, `radEmu` can handle 1000 taxa, 800 samples and 12 covariates. You may want to get a 35-minute coffee break while it runs, though.
- `radEmu` is publicly available in open-source software... right here!

If you are a **statistician**, some of the things that you may like about `radEmu` include
Expand Down

0 comments on commit fc72355

Please sign in to comment.