DESCRIPTION

Package: radEmu
Title: Using Relative Abundance Data to Estimate of Multiplicative Differences in Mean Absolute Abundance 
Version: 1.2.0.0
Authors@R: as.person(c(
    "David Clausen <dsc24@uw.edu> [aut, cre]",
    "Amy Willis [aut]", 
    "Sarah Teichman [aut]"
  ))
Description: A differential abundance method for the analysis of microbiome data. radEmu estimates fold-differences in the abundance of taxa across samples relative to "typical" fold-differences. Notably, it does not require pseudocounts, nor choosing a denominator taxon. 
URL: https://github.com/statdivlab/radEmu, https://statdivlab.github.io/radEmu/
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: 
    MASS,
    Matrix,
    methods,
    magrittr,
    rlang,
    R (>= 2.10)
Suggests: 
    testthat (>= 3.0.0),
    numDeriv,
    phyloseq,
    TreeSummarizedExperiment,
    SummarizedExperiment,
    knitr,
    dplyr,
    ggplot2,
    stringr, 
    parallel,
    rmarkdown
Config/testthat/edition: 3
VignetteBuilder: knitr