msqrob 1.13

msqrob 1.13.1

Implemented msqrobAggregate() method for SummarizedExperiment objects.

msqrob 1.13.0

New Bioconductor devel release 3.20

msqrob 1.12

msqrob 1.12.0

New Bioconductor stable release 3.19

msqrob 1.11.2

Fixed issue related to levels of a ridge variable
Fixed issue when fitting only one random effect

msqrob 1.11.1

Fixed issues related to reference class changes in the models
Fixed issue related to colData assay levels
Refactored internal code

msqrob 1.6.2

Fixed issues related to residual degrees of freedom of overparameterized models.
Fixed issue relating to coldata variables as factors.

msqrob2 1.5.4

Removed the full lmer model that was accidently left in the statmodel object.

msqrob2 1.5.3

Added the option to use mixed models without ridge regression
Added the option to use rowdata variables in the mixed models

msqrob2 1.5.1

Fix weighted variance covariance matrix and QR decomposition in the msqrobLmer function

msqrob2 1.1.1

Fix filtering steps in vignette: now using QFeatures::filterFeatures()

msqrob2 0.99.6

Update authors in Description file

msqrob2 0.99.5

Fix standard errors on the model parameter estimates by msqrobLmer when using doQR = TRUE

msqrob2 0.99.4

Minor update vignette. Replace eval=FALSE in one R chunk so that the code is evaluated.

msqrob2 0.99.3

Resolved notes on signalers
Resolved examples with lines wider than 100 characters
Avoiding sapply and 1:...

msqrob2 0.99.2

Added a NEWS.md file to track changes to the package.
Changed dependency from R (>= 4.0) to R (>= 4.1)
Updated citation file

Changes in version 0.99.1

Submission to Bioc