From 939034884865767ba08a992b3db03b9b98b9704a Mon Sep 17 00:00:00 2001
From: Jaebeom Kim <68528165+jaebeom-kim@users.noreply.github.com>
Date: Mon, 2 Dec 2024 17:39:34 +0900
Subject: [PATCH] Added taxonomy report parameter in StructureSearchJob branch
 (#95)

* add taxonomy report parameter in StructureSearchJob branch

* make a separate if branch for taxonomy report option
---
 backend/worker.go | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/backend/worker.go b/backend/worker.go
index ddbfd1c..55f3583 100644
--- a/backend/worker.go
+++ b/backend/worker.go
@@ -390,6 +390,11 @@ mv -f -- "${BASE}/query.lookup_tmp" "${BASE}/query.lookup"
 					parameters = append(parameters, "--greedy-best-hits")
 				}
 
+				if params.Taxonomy {
+					parameters = append(parameters, "--report-mode")
+					parameters = append(parameters, "0")
+				}
+
 				if params.Taxonomy && job.TaxFilter != "" {
 					parameters = append(parameters, "--taxon-list")
 					parameters = append(parameters, job.TaxFilter)