diff --git a/CHANGELOG.md b/CHANGELOG.md index 35bcee7..a4a0f7f 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,6 @@ All releases can also be found here: https://github.com/snijderlab/stitch/releases. -# Upcoming Release +# v1.5.0 * Added loading of sequences from mmCIF files, for ModelAngelo (#207, #217) * Added loading of sequences from Peaks 11 and Peaks Ab @@ -10,6 +10,7 @@ All releases can also be found here: https://github.com/snijderlab/stitch/releas * Added more customization options for peptide fragmentation * Added hash for all used files in the HTML report (#229) * Added the option to call parts of a batchfile from another file (`include!()`) see the examples (#111, #209) +* Added depth of coverage information to the Fasta export * Updated the main overview header (#212) * Updated the command line interface (CLI) to be more friendly, *Note: calling stitch has changed to `stitch run `* * Updated the batchfile parsing to provide more helpful error messages @@ -20,7 +21,7 @@ All releases can also be found here: https://github.com/snijderlab/stitch/releas * Fixed small remaining intensity \[1-2\] scaling for Novor reads to scale \[0-1\] * Fixed issues with the generation of the consensus sequences in relation to the mass alignment and I/L disambiguation (#220) * Fixed leading insertions in reads placement displayed in a different colour, for more clarity in the alignment -* Fixed bugs (#222, #230) +* Fixed bugs (#193, #222, #230, #242, #243, #244) * Performance improvements * Many more small fixes and improvements diff --git a/CITATION.cff b/CITATION.cff index 969fe2a..c458c8a 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -1,5 +1,5 @@ title: Stitch -version: 1.5.0-rc.1 +version: 1.5.0 abstract: Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling authors: - affiliation: Utrecht University diff --git a/stitch/stitch.csproj b/stitch/stitch.csproj index c686c2e..279c433 100644 --- a/stitch/stitch.csproj +++ b/stitch/stitch.csproj @@ -4,7 +4,7 @@ Exe net7.0 StandardRuleset.ruleset - 1.5.0-rc.1 + 1.5.0 true