Install latest TileDB release for ASAN CI

single-cell-data · Dec 16, 2024 · 28e0b3b · 28e0b3b
1 parent 1825a77
commit 28e0b3b
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Showing 2 changed files with 28 additions and 6 deletions.
diff --git a/.github/workflows/libtiledbsoma-asan-ci.yml b/.github/workflows/libtiledbsoma-asan-ci.yml
@@ -12,9 +12,26 @@ jobs:
   asan:
     runs-on: ubuntu-24.04
     steps:
-    - name: Checkout TileDB-SOMA
-      uses: actions/checkout@v4
-    - name: Build libtiledbsoma
-      run: ./scripts/bld --build=ASAN --no-tiledb-deprecated=true --werror=true
-    - name: Run libTileDB-SOMA unittests
-      run: ctest --test-dir build/libtiledbsoma -C ASAN --verbose --rerun-failed --output-on-failure
+      - name: Checkout TileDB-SOMA
+        uses: actions/checkout@v4
+      - name: Install pre-built libtiledb
+        run: |
+          mkdir -p external
+            # Please do not edit manually -- let scripts/update-tiledb-version.py update this
+          wget --quiet https://github.com/TileDB-Inc/TileDB/releases/download/2.27.0/tiledb-linux-x86_64-2.27.0-2862c30.tar.gz
+          tar -C external -xzf tiledb-*.tar.gz
+          ls external/lib/
+      - name: Build and install libtiledbsoma
+        run: |
+          cmake -S libtiledbsoma -B build-libtiledbsoma \
+            -D CMAKE_BUILD_TYPE=ASAN \
+            -D CMAKE_PREFIX_PATH=$(pwd)/external/ \
+            -D CMAKE_INSTALL_PREFIX:PATH=$(pwd)/external/ \
+            -D OVERRIDE_INSTALL_PREFIX=OFF \
+            -D DOWNLOAD_TILEDB_PREBUILT=OFF \
+            -D TILEDB_REMOVE_DEPRECATIONS=ON \
+            -D FORCE_BUILD_TILEDB=OFF
+          cmake --build build-libtiledbsoma -j 2
+          ls external/lib/
+      - name: Run C++ unittests
+        run: ctest --test-dir build/libtiledbsoma -C ASAN --verbose --rerun-failed --output-on-failure
diff --git a/scripts/update-tiledb-version.py b/scripts/update-tiledb-version.py
@@ -121,6 +121,11 @@ def main(args):
     )
     update_version(filepath, new_version, new_hash)
 
+    filepath = (
+        f"{os.path.dirname(__file__)}/../.github/workflows/libtiledbsoma-asan-ci.yml"
+    )
+    update_version(filepath, new_version, new_hash)
+
 
 if __name__ == "__main__":
     description = (