makefile

VERSION:=$(shell grep Version: DESCRIPTION|sed 's/Version: //')
NAME:=$(shell grep Package: DESCRIPTION|sed 's/Package: //')
PACKAGEFILE:=$(NAME)_$(VERSION).tar.gz
all: ../$(PACKAGEFILE) README.md

.PHONY: all install

install:
	R -e 'devtools::install_github("sherrillmix/DNAPlotR")'

localInstall:
	R -e 'devtools::install()'

man: R/*.R
	R -e 'devtools::document()'
	touch man

README.md: README.Rmd
	R -e 'knitr::opts_chunk$$set(fig.path="README_files/");knitr::knit("README.Rmd")'

inst/doc: vignettes/*.Rnw R/*.R
	make localInstall
	R -e 'devtools::build_vignettes()'
	if [ -d inst/doc ];then touch inst/doc;fi

data: data-raw/makeAminoColors.R
	Rscript data-raw/makeAminoColors.R
	touch data
	
../$(PACKAGEFILE): man R/*.R DESCRIPTION inst/doc data tests/testthat/*.R
	sed -i "s/^Date:.*$$/Date: `date +%Y-%m-%d`/" DESCRIPTION
	R -e "devtools::check(build_args = c('--compact-vignettes=both'));devtools::build()"