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Explore Query Page
Victor Lin edited this page Jul 15, 2020
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End goal: query for a set of accessions and show summary visualization, with links to individual summary report pages.
Example website endpoints:
/explore?family=Coronaviridae
/explore?accession=EU82727.1
Web page will show a simple table of SRA accession IDs with links to summary report pages. Example:
Results for query family=Coronaviridae
:
SRA accession | Study Name | Score |
---|---|---|
SRR7287110 | Felis catus Raw sequence reads | 100 |
ERR2756788 | Metagenomics of viral communities of vampire bats in Peru | 84 |
... | ... | ... |
We can start with top 10 results, then add pagination.
- Craft SQL queries that reflect actual queries. Example:
select * where family=Coronaviridae order by score limit 10
- Add database endpoints for above queries with same parameter. Example:
Task<ActionResult<Run>> GetRuns(string family)
- Call database endpoint from webpage and render results.
TBD
Reference
Records
Work in Progress
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