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Improvements for experimental geo page #115

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victorlin opened this issue Mar 8, 2021 · 2 comments
Open
5 of 9 tasks

Improvements for experimental geo page #115

victorlin opened this issue Mar 8, 2021 · 2 comments
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@victorlin
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victorlin commented Mar 8, 2021

Originally posted by @ababaian in #114 (comment)

  • The SRA links should be to the RdRP / rsummary results not the nsummary results. Added in Extend Explorer component for RdRP data #118.
  • Is it possible to have a click to select a single sample? Added in Click to select Feature of Map -- Development #125
  • Double clicking resets the world map to the original position which is kind of annoying.
  • I'm getting some transparency on the points when I use Firefox but not in Chrome (see PR comment). Add a note to use Chrome perhaps. Get to the bottom of this?
  • Reduce the number of listed samples to 20 and add "pagination to results"
  • Creating an API / link to a predetermined view will be helpful. In the same vein passing entire "list of SRA samples" from a Explorer View into the Geo View will be great. Then you can say "Select all Ebola Virus", and from there view it on the map,
  • For selection boxes, perhaps set an upper limit of 10,000 selections before it times out, if you select too much it kind of hangs. That's enough to select all Austrialia or East/West seaboard of the States.
  • I don't think we have to do this now, but if we start to stress the server, changing the default map will help with load (maybe). Default location: Serratus, BC

from @victorlin:

  • investigate using Leaflet over Plotly
@ababaian
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ababaian commented Mar 8, 2021

I think yeah avoid a link for the meanwhile so as not to jump between analyses and "there is no RdRP here".

@oncogenomics
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The click events on single samples should be possible:
Plotly click events in python.
Interactive graph click events with plotly.

@lukepereira lukepereira self-assigned this Mar 30, 2023
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