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mkdocs.yml
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site_name: Brain Imaging Data Structure v1.6.1-dev
site_url: https://bids-specification.readthedocs.io/en/stable/
theme:
name: material
favicon: images/favicon.png
logo: images/logo.png
features:
- navigation.sections
copyright: Copyright © 2018-2022, BIDS Contributors - <a href="https://creativecommons.org/licenses/by/4.0/">CC BY 4.0</a>
extra:
generator: false
social:
- icon: fontawesome/brands/twitter
link: https://twitter.com/BIDSstandard/
- icon: fontawesome/brands/github
link: https://github.com/bids-standard/bids-specification/
- icon: fontawesome/brands/google
link: https://groups.google.com/g/bids-discussion
extra_javascript:
- js/jquery-3.6.0.min.js
markdown_extensions:
- toc:
anchorlink: true
- pymdownx.superfences
plugins:
- search
- branchcustomization:
update_config:
- branch: /(?!^master$)/
+extra_css:
- css/watermark.css
- macros:
module_name: tools/mkdocs_macros_bids/main
docs_dir: 'src'
use_directory_urls: false
nav:
- The BIDS Specification:
- Introduction: 01-introduction.md
- Common principles: 02-common-principles.md
- Modality agnostic files: 03-modality-agnostic-files.md
- Modality specific files:
- Magnetic Resonance Imaging: 04-modality-specific-files/01-magnetic-resonance-imaging-data.md
- Magnetoencephalography: 04-modality-specific-files/02-magnetoencephalography.md
- Electroencephalography: 04-modality-specific-files/03-electroencephalography.md
- Intracranial Electroencephalography: 04-modality-specific-files/04-intracranial-electroencephalography.md
- Task events: 04-modality-specific-files/05-task-events.md
- Physiological and other continuous recordings: 04-modality-specific-files/06-physiological-and-other-continuous-recordings.md
- Behavioral experiments (with no neural recordings): 04-modality-specific-files/07-behavioral-experiments.md
- Genetic Descriptor: 04-modality-specific-files/08-genetic-descriptor.md
- Positron Emission Tomography: 04-modality-specific-files/09-positron-emission-tomography.md
- Microscopy: 04-modality-specific-files/10-microscopy.md
- Derivatives:
- BIDS Derivatives: 05-derivatives/01-introduction.md
- Common data types and metadata: 05-derivatives/02-common-data-types.md
- Imaging data types: 05-derivatives/03-imaging.md
- Longitudinal and multi-site studies: 06-longitudinal-and-multi-site-studies.md
- BIDS Extension Proposals: 07-extensions.md
- Appendix:
- Contributors: 99-appendices/01-contributors.md
- Licenses: 99-appendices/02-licenses.md
- Hierarchical Event Descriptors: 99-appendices/03-hed.md
- Entity table: 99-appendices/04-entity-table.md
- Units: 99-appendices/05-units.md
- MEG file formats: 99-appendices/06-meg-file-formats.md
- MEG systems: 99-appendices/07-meg-systems.md
- Coordinate systems: 99-appendices/08-coordinate-systems.md
- Entities: 99-appendices/09-entities.md
- File collections: 99-appendices/10-file-collections.md
- Quantitative MRI: 99-appendices/11-qmri.md
- Arterial Spin Labeling: 99-appendices/12-arterial-spin-labeling.md
- Cross modality correspondence: 99-appendices/13-cross-modality-correspondence.md
- Glossary: 99-appendices/14-glossary.md
- Changelog: CHANGES.md
- The BIDS Starter Kit:
- Website: https://bids-standard.github.io/bids-starter-kit
- Tutorials: https://bids-standard.github.io/bids-starter-kit/tutorials/tutorials.html
- GitHub repository: https://github.com/bids-standard/bids-starter-kit