From 3d1d636518d99a0a356d47dad68b91b94a527887 Mon Sep 17 00:00:00 2001
From: FloWuenne <flowuenne@gmail.com>
Date: Fri, 21 Jul 2023 15:51:41 +0200
Subject: [PATCH 1/4] Added gitpod yml config file.

---
 .gitpod.yml | 8 ++++++++
 1 file changed, 8 insertions(+)
 create mode 100644 .gitpod.yml

diff --git a/.gitpod.yml b/.gitpod.yml
new file mode 100644
index 00000000..ab2840af
--- /dev/null
+++ b/.gitpod.yml
@@ -0,0 +1,8 @@
+image: gitpod/workspace-python
+tasks:
+  - name: install spatialdata universe and dependencies
+    command: |
+      python -m pip install -e .
+      python -m pip install -r requirements-dev.txt
+      python -m pip install spatialdata-io spatialdata-plot
+      pre-commit install --install-hooks
\ No newline at end of file

From f47d387b5e0063919ac8d1e0b06457e03f5f6ccd Mon Sep 17 00:00:00 2001
From: Florian Wuennemann <flowuenne@gmail.com>
Date: Fri, 21 Jul 2023 15:57:50 +0200
Subject: [PATCH 2/4] Update .gitpod.yml

Modified gitpod file due to failing installation
---
 .gitpod.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.gitpod.yml b/.gitpod.yml
index ab2840af..7a19f12a 100644
--- a/.gitpod.yml
+++ b/.gitpod.yml
@@ -2,7 +2,7 @@ image: gitpod/workspace-python
 tasks:
   - name: install spatialdata universe and dependencies
     command: |
-      python -m pip install -e .
-      python -m pip install -r requirements-dev.txt
+      pip install --upgrade pip
+      python -m pip install -r pyproject.toml
       python -m pip install spatialdata-io spatialdata-plot
-      pre-commit install --install-hooks
\ No newline at end of file
+      pre-commit install --install-hooks

From 1fb383af6ed70fa0309f26ac1a7d13350e18bdbc Mon Sep 17 00:00:00 2001
From: Florian Wuennemann <flowuenne@gmail.com>
Date: Fri, 21 Jul 2023 16:00:17 +0200
Subject: [PATCH 3/4] Update .gitpod.yml

Testing instead of building, with fixed container link
---
 .gitpod.yml | 9 +--------
 1 file changed, 1 insertion(+), 8 deletions(-)

diff --git a/.gitpod.yml b/.gitpod.yml
index 7a19f12a..de490940 100644
--- a/.gitpod.yml
+++ b/.gitpod.yml
@@ -1,8 +1 @@
-image: gitpod/workspace-python
-tasks:
-  - name: install spatialdata universe and dependencies
-    command: |
-      pip install --upgrade pip
-      python -m pip install -r pyproject.toml
-      python -m pip install spatialdata-io spatialdata-plot
-      pre-commit install --install-hooks
+image: wuennemannflorian/spatialdata_test:latest

From 1d96213d87533d79e68071f96fec555ce75d31e4 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Fri, 21 Jul 2023 14:15:03 +0000
Subject: [PATCH 4/4] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 README.md | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 9b26e9ea..a1d8b8c2 100644
--- a/README.md
+++ b/README.md
@@ -45,9 +45,10 @@ If you found a bug, please use the [issue tracker][issue-tracker].
 [L Marconato*, G Palla*, KA Yamauchi*, I Virshup*, E Heidari, T Treis, M Toth, R Shrestha, H Vöhringer, W Huber, M Gerstung, J Moore, FJ Theis, O Stegle, bioRxiv, 2023](https://www.biorxiv.org/content/10.1101/2023.05.05.539647v1). \* = equal contribution
 
 ## Sponsor
+
 The spatialdata project is supported by the EMBL International PhD Programme and the Chan Zuckerberg Initiative.
 
-[//]: # (numfocus-fiscal-sponsor-attribution)
+[//]: # "numfocus-fiscal-sponsor-attribution"
 
 The scverse project uses a [consensus based governance model](https://scverse.org/about/roles/) and is fiscally sponsored by [NumFOCUS](https://numfocus.org/). Consider making a [tax-deductible donation](https://numfocus.org/donate-to-scverse) to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.