From 6217d7cc05bfa4c679ca45d92a774a1ae30a1610 Mon Sep 17 00:00:00 2001
From: Pariksheet Nanda <pnanda@umich.edu>
Date: Tue, 16 Apr 2024 14:21:42 -0400
Subject: [PATCH] drop unmaintained pygeos for shapely 2.0

---
 pyproject.toml              |  3 +--
 src/spatialdata/__init__.py |  7 -------
 src/spatialdata/_compat.py  | 27 ---------------------------
 3 files changed, 1 insertion(+), 36 deletions(-)
 delete mode 100644 src/spatialdata/_compat.py

diff --git a/pyproject.toml b/pyproject.toml
index e6c187c1..860a2062 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -27,7 +27,7 @@ dependencies = [
     "dask-image",
     "dask<=2024.2.1",
     "fsspec<=2023.6",
-    "geopandas",
+    "geopandas>=0.14",
     "multiscale_spatial_image==0.11.2",
     "networkx",
     "numpy",
@@ -35,7 +35,6 @@ dependencies = [
     "pandas",
     "pooch",
     "pyarrow",
-    "pygeos",
     "rich",
     "shapely>=2.0.1",
     "spatial_image==0.3.0",
diff --git a/src/spatialdata/__init__.py b/src/spatialdata/__init__.py
index 18eae0f8..3fd835d9 100644
--- a/src/spatialdata/__init__.py
+++ b/src/spatialdata/__init__.py
@@ -4,13 +4,6 @@
 
 __version__ = version("spatialdata")
 
-# Forcing usage of shapely 2.0 by geopandas
-# https://geopandas.org/en/stable/getting_started/install.html#using-the-optional-pygeos-dependency
-from ._compat import _check_geopandas_using_shapely
-
-_check_geopandas_using_shapely()
-
-
 __all__ = [
     "models",
     "transformations",
diff --git a/src/spatialdata/_compat.py b/src/spatialdata/_compat.py
deleted file mode 100644
index 3fb9b57a..00000000
--- a/src/spatialdata/_compat.py
+++ /dev/null
@@ -1,27 +0,0 @@
-def _check_geopandas_using_shapely() -> None:
-    """Check if geopandas is using shapely.
-
-    This is required until it becomes the default.
-    """
-    import warnings
-
-    with warnings.catch_warnings():
-        warnings.filterwarnings(
-            "ignore",
-            "Shapely 2.0 is installed, but because PyGEOS is also installed",
-            category=UserWarning,
-        )
-        import geopandas
-
-        if geopandas.options.use_pygeos is True:
-            geopandas.options.use_pygeos = False
-
-            warnings.warn(
-                (
-                    "Geopandas was set to use PyGEOS, changing to shapely 2.0 with:"
-                    "\n\n\tgeopandas.options.use_pygeos = True\n\n"
-                    "If you intended to use PyGEOS, set the option to False."
-                ),
-                UserWarning,
-                stacklevel=2,
-            )