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Support Reading N5 Datasets #6256

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normanrz opened this issue Jun 2, 2022 · 4 comments · Fixed by #6466
Closed

Support Reading N5 Datasets #6256

normanrz opened this issue Jun 2, 2022 · 4 comments · Fixed by #6466
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@leowe
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backend enhancement zarr

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@normanrz
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normanrz commented Jun 2, 2022

Detailed Description

Building on top of our Zarr implementation, it would be great to also support N5. N5 is very similar to Zarr, but has slightly different file names and metadata. N5 provides a multi-scale convention.
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normanrz commented Jun 2, 2022

Open organelle has a ton of datasets for testing, e.g. s3://janelia-cosem-datasets/jrc_macrophage-2/jrc_macrophage-2.n5

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fm3 commented Jun 2, 2022

Is this about reading N5 datasets, or about streaming our datasets as N5?

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normanrz commented Jun 2, 2022

Reading

@fm3 fm3 changed the title Support N5 Support Reading N5 Datasets Jun 2, 2022
@normanrz normanrz mentioned this issue Jul 1, 2022
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@normanrz normanrz added the zarr label Jul 1, 2022
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leowe commented Aug 11, 2022

N5 format: https://github.com/saalfeldlab/n5

@leowe leowe mentioned this issue Sep 13, 2022
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N5 support scalableminds/webknossos
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