diff --git a/README.md b/README.md index 5c5641e..fe06bee 100755 --- a/README.md +++ b/README.md @@ -15,12 +15,12 @@ Compatible formats: To download the full app directly, go to the [release page](https://github.com/royludo/cd2sbgnml/releases). -More information can be found in the [Wiki](https://github.com/royludo/cd2sbgnml/wiki). +More information can be found in the [Wiki](https://github.com/sbgn/cd2sbgnml/wiki). Javadoc is available [here](https://royludo.github.io/cd2sbgnml). -All known issues and limitations of the translator are listed in the [issues](https://github.com/royludo/cd2sbgnml/issues) -and on this [wiki page](https://github.com/royludo/cd2sbgnml/wiki/Limitations). +All known issues and limitations of the translator are listed in the [issues](https://github.com/sbgn/cd2sbgnml/issues) +and on this [wiki page](https://github.com/sbgn/cd2sbgnml/wiki/Limitations). ## Requirements @@ -59,9 +59,13 @@ directly calling the package with `java -jar`. Be sure to have JavaFX working in With the scripts, all log messages will go to System.out. With the GUI, everything will be written in the selected log file. +## Translation of large-scale biological maps - examples: +- [ACSN map collection](https://acsn.curie.fr/ACSN2/downloads.html) +- [RECON Human Metabolic network](https://github.com/sbgn/cd2sbgnml/blob/master/samples/RECON.zip) (last update: 29/01/2019) + ## Contributions and issues -If you have any suggestions or want to report a bug, don't hesitate to create an [issue](https://github.com/royludo/cd2sbgnml/issues). +If you have any suggestions or want to report a bug, don't hesitate to create an [issue](https://github.com/sbgn/cd2sbgnml/issues). Pull requests and all forms of contribution will be warmly welcomed. ## Useful links