diff --git a/man/ColorDimSplit.Rd b/man/ColorDimSplit.Rd
index 33efebabd..dc3b1c726 100644
--- a/man/ColorDimSplit.Rd
+++ b/man/ColorDimSplit.Rd
@@ -55,6 +55,7 @@ useful for crowded plots if points of interest are being buried. (default is FAL
 geom_label)}
     \item{\code{alpha}}{Alpha value for plotting (default is 1)}
     \item{\code{repel}}{Repel labels}
+    \item{\code{stroke.size}}{Adjust stroke (outline) size of points}
     \item{\code{cells.highlight}}{A list of character or numeric vectors of cells to
 highlight. If only one group of cells desired, can simply
 pass a vector instead of a list. If set, colors selected cells to the color(s)
diff --git a/man/DimPlot.Rd b/man/DimPlot.Rd
index a46a402f0..e7bf0ad2c 100644
--- a/man/DimPlot.Rd
+++ b/man/DimPlot.Rd
@@ -27,6 +27,7 @@ DimPlot(
   label.box = FALSE,
   repel = FALSE,
   alpha = 1,
+  stroke.size = NULL,
   cells.highlight = NULL,
   cols.highlight = "#DE2D26",
   sizes.highlight = 1,
@@ -91,6 +92,8 @@ geom_label)}
 
 \item{alpha}{Alpha value for plotting (default is 1)}
 
+\item{stroke.size}{Adjust stroke (outline) size of points}
+
 \item{cells.highlight}{A list of character or numeric vectors of cells to
 highlight. If only one group of cells desired, can simply
 pass a vector instead of a list. If set, colors selected cells to the color(s)
diff --git a/man/ISpatialDimPlot.Rd b/man/ISpatialDimPlot.Rd
index ebe615fe8..e486fa164 100644
--- a/man/ISpatialDimPlot.Rd
+++ b/man/ISpatialDimPlot.Rd
@@ -17,7 +17,7 @@ ISpatialDimPlot(
 
 \item{image}{Name of the image to use in the plot}
 
-\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in 
+\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in
 order to matchthe plot with the specified `image` - defaults to "lowres"}
 
 \item{group.by}{Name of meta.data column to group the data by}
diff --git a/man/ISpatialFeaturePlot.Rd b/man/ISpatialFeaturePlot.Rd
index e4bd477ba..2b70af290 100644
--- a/man/ISpatialFeaturePlot.Rd
+++ b/man/ISpatialFeaturePlot.Rd
@@ -20,7 +20,7 @@ ISpatialFeaturePlot(
 
 \item{image}{Name of the image to use in the plot}
 
-\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in 
+\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in
 order to matchthe plot with the specified `image` - defaults to "lowres"}
 
 \item{slot}{If plotting a feature, which data slot to pull from (counts,
diff --git a/man/LinkedPlots.Rd b/man/LinkedPlots.Rd
index 6ed68241f..91a09e91b 100644
--- a/man/LinkedPlots.Rd
+++ b/man/LinkedPlots.Rd
@@ -40,7 +40,7 @@ LinkedFeaturePlot(
 
 \item{image}{Name of the image to use in the plot}
 
-\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in 
+\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in
 order to matchthe plot with the specified `image` - defaults to "lowres"}
 
 \item{group.by}{Name of meta.data column to group the data by}
diff --git a/man/MULTIseqDemux.Rd b/man/MULTIseqDemux.Rd
index 4739af19e..d7255d008 100644
--- a/man/MULTIseqDemux.Rd
+++ b/man/MULTIseqDemux.Rd
@@ -42,6 +42,6 @@ object <- MULTIseqDemux(object)
 
 }
 \references{
-\url{https://www.biorxiv.org/content/10.1101/387241v1}
+\url{https://doi.org/10.1038/s41592-019-0433-8}
 }
 \concept{preprocessing}
diff --git a/man/SingleDimPlot.Rd b/man/SingleDimPlot.Rd
index 413bd721a..2c7f467cd 100644
--- a/man/SingleDimPlot.Rd
+++ b/man/SingleDimPlot.Rd
@@ -13,6 +13,7 @@ SingleDimPlot(
   shape.by = NULL,
   alpha = 1,
   alpha.by = NULL,
+  stroke.size = NULL,
   order = NULL,
   label = FALSE,
   repel = FALSE,
@@ -47,6 +48,8 @@ allowing for both different colors and different shapes on cells.}
 
 \item{alpha.by}{Mapping variable for the point alpha value}
 
+\item{stroke.size}{Adjust stroke (outline) size of points}
+
 \item{order}{Specify the order of plotting for the idents. This can be
 useful for crowded plots if points of interest are being buried. Provide
 either a full list of valid idents or a subset to be plotted last (on top).}
diff --git a/man/SingleSpatialPlot.Rd b/man/SingleSpatialPlot.Rd
index f199eac83..4cf8530e6 100644
--- a/man/SingleSpatialPlot.Rd
+++ b/man/SingleSpatialPlot.Rd
@@ -37,7 +37,7 @@ colors}
 \item{image.alpha}{Adjust the opacity of the background images. Set to 0 to
 remove.}
 
-\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in 
+\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in
 order to matchthe plot with the specified `image` - defaults to "lowres"}
 
 \item{pt.alpha}{Adjust the opacity of the points if plotting a
@@ -48,7 +48,7 @@ to show entire background image.}
 
 \item{pt.size.factor}{Sets the size of the points relative to spot.radius}
 
-\item{shape}{Control the shape of the spots - same as the ggplot2 parameter. 
+\item{shape}{Control the shape of the spots - same as the ggplot2 parameter.
 The default is 21, which plots cirlces - use 22 to plot squares.}
 
 \item{stroke}{Control the width of the border around the spots}
diff --git a/man/SpatialPlot.Rd b/man/SpatialPlot.Rd
index e58d5e56b..700683419 100644
--- a/man/SpatialPlot.Rd
+++ b/man/SpatialPlot.Rd
@@ -105,7 +105,7 @@ default, ggplot2 assigns colors}
 \item{image.alpha}{Adjust the opacity of the background images. Set to 0 to
 remove.}
 
-\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in 
+\item{image.scale}{Choose the scale factor ("lowres"/"hires") to apply in
 order to matchthe plot with the specified `image` - defaults to "lowres"}
 
 \item{crop}{Crop the plot in to focus on points plotted. Set to \code{FALSE} to show
@@ -166,7 +166,7 @@ themeing will not work when plotting multiple features/groupings}
 min and max for SpatialFeaturePlot. For SpatialDimPlot, provide a single
 alpha value for each plot.}
 
-\item{shape}{Control the shape of the spots - same as the ggplot2 parameter. 
+\item{shape}{Control the shape of the spots - same as the ggplot2 parameter.
 The default is 21, which plots circles - use 22 to plot squares.}
 
 \item{stroke}{Control the width of the border around the spots}