From 7cfbcc0683ccaf9710c813e6cdbc7864a23d751e Mon Sep 17 00:00:00 2001 From: Tyler Chafin Date: Fri, 22 Nov 2024 09:34:06 +0000 Subject: [PATCH] Update docs/usage.md Co-authored-by: Matthieu Muffato --- docs/usage.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/docs/usage.md b/docs/usage.md index 71d4d3ea..6f8909bf 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -78,7 +78,8 @@ The BlobToolKit pipeline can be run in many different ways. The default way requ It is a good idea to put a date suffix for each database location so you know at a glance whether you are using the latest version. We are using the `YYYY_MM` format as we do not expect the databases to be updated more frequently than once a month. However, feel free to use `DATE=YYYY_MM_DD` or a different format if you prefer. -Note that all input databases may be optionall passed directly to the pipeline compressed as `.tar.gz`, and the pipeline will handle decompression. +Note that all input databases may be optionally passed directly to the pipeline compressed as `.tar.gz`, and the pipeline will handle decompression. +The instructions below show how to build each input database in _two_ forms: decompressed _and_ compressed. You may not need to do both. Select the one that is most appropriate for how you want to use the pipeline. #### 1. NCBI taxdump database