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Release Prep v2.2.0 #167

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7 of 9 tasks
samuel-marsh opened this issue Mar 12, 2024 · 3 comments
Closed
7 of 9 tasks

Release Prep v2.2.0 #167

samuel-marsh opened this issue Mar 12, 2024 · 3 comments
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documentation Improvements or additions to documentation enhancement Enhance existing function/feature New Feature New feature to add Release Prep Vignette Related Issues with or Updates to vignettes or pkgdown website

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samuel-marsh commented Mar 12, 2024 •
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To Do:
@samuel-marsh samuel-marsh added documentation Improvements or additions to documentation enhancement Enhance existing function/feature New Feature New feature to add Vignette Related Issues with or Updates to vignettes or pkgdown website Release Prep labels Mar 12, 2024
@samuel-marsh samuel-marsh self-assigned this Mar 12, 2024
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samuel-marsh commented Mar 19, 2024 •
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- [ ] Add Spatial Assay to as.anndata?
Not now. Have to figure out some image conversion metrics and not priority for time being.

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samuel-marsh commented Apr 24, 2024 •
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Final LIGER related changes:

  • Idents()
  • Rename_Clusters()
  • Factor Cor Plot Clustering

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samuel-marsh commented Jun 6, 2024 •
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Vignette Changes Needed:

  • seq_zeros
  • Chicken as species
  • Spatial Plots
  • cutoff line width
  • Add mito ribo dual
  • scripts for qc lists

LIGER Vignettes:

  • Subset liger
  • liger cells by identities
  • LIGER/Seurat Shared Generics
  • Rename Clusters for LIGER
  • Factor Cor Plots

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documentation Improvements or additions to documentation enhancement Enhance existing function/feature New Feature New feature to add Release Prep Vignette Related Issues with or Updates to vignettes or pkgdown website
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