Merge branch 'demo' of github.com:vasudeva8/htslib into demo

samtools · Jun 2, 2023 · b6737c9 · b6737c9
1 parent 24905a7
commit b6737c9
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Showing 8 changed files with 9 additions and 9 deletions.
diff --git a/samples/add_header.c b/samples/add_header.c
@@ -62,7 +62,7 @@ int main(int argc, char *argv[])
         goto end;
     }
     inname = argv[1];
-    
+
     if (!(infile = sam_open(inname, "r"))) {
         printf("Could not open %s\n", inname);
         goto end;

diff --git a/samples/index_write.c b/samples/index_write.c
@@ -142,7 +142,7 @@ int main(int argc, char *argv[])
         goto end;
     }
     ret = EXIT_SUCCESS;
-    
+
 end:
     //cleanup
     if (in_samhdr) {

diff --git a/samples/read_aux.c b/samples/read_aux.c
@@ -182,7 +182,7 @@ int main(int argc, char *argv[])
                 }
                 printf("\n");
             }
-        }        
+        }
     }
     if (ret_r < -1) {
         //read error

diff --git a/samples/read_header.c b/samples/read_header.c
@@ -54,7 +54,7 @@ int main(int argc, char *argv[])
     samFile *infile = NULL;
     sam_hdr_t *in_samhdr = NULL;
     kstring_t data = KS_INITIALIZE;
-    
+
     //read_header infile header tag
     if (argc < 3 || argc > 6) {
         print_usage(stderr);
@@ -76,7 +76,7 @@ int main(int argc, char *argv[])
         }
         else if (header[0] == 'P' && header[1] == 'G') {
             id = "ID";
-        } 
+        }
         else if (header[0] == 'C' && header[1] == 'O') {
             id = "";
         }

diff --git a/samples/split.c b/samples/split.c
@@ -55,7 +55,7 @@ int main(int argc, char *argv[])
     samFile *infile = NULL, *outfile1 = NULL, *outfile2 = NULL;
     sam_hdr_t *in_samhdr = NULL;
     bam1_t *bamdata = NULL;
-    
+
     if (argc != 3) {
         print_usage(stdout);
         goto end;

diff --git a/samples/split2.c b/samples/split2.c
@@ -55,7 +55,7 @@ int main(int argc, char *argv[])
     samFile *infile = NULL, *outfile1 = NULL, *outfile2 = NULL;
     sam_hdr_t *in_samhdr = NULL;
     bam1_t *bamdata = NULL;
-    
+
     if (argc != 3) {
         print_usage(stdout);
         goto end;

diff --git a/samples/split_thread1.c b/samples/split_thread1.c
@@ -55,7 +55,7 @@ int main(int argc, char *argv[])
     samFile *infile = NULL, *outfile1 = NULL, *outfile2 = NULL;
     sam_hdr_t *in_samhdr = NULL;
     bam1_t *bamdata = NULL;
-    
+
     if (argc != 3) {
         print_usage(stdout);
         goto end;

diff --git a/samples/split_thread2.c b/samples/split_thread2.c
@@ -57,7 +57,7 @@ int main(int argc, char *argv[])
     sam_hdr_t *in_samhdr = NULL;
     bam1_t *bamdata = NULL;
     htsThreadPool tpool = {NULL, 0};
-    
+
     if (argc != 3) {
         print_usage(stdout);
         goto end;
-Original file line number
+Diff line change
@@ Expand Up / @@ -182,7 +182,7 @@ int main(int argc, char *argv[]) @@
                     }
                     printf("\n");
                 }
-            }
+            }
         }
         if (ret_r < -1) {
             //read error
@@ Expand Down @@