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conda_env.yml
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conda_env.yml
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name: seqQscorer
channels:
- anaconda
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- alsa-lib=1.2.3=h516909a_0
- bedtools=2.29.2=hc088bd4_0
- binutils_impl_linux-64=2.35.1=h17ad2fc_0
- binutils_linux-64=2.35=hc3fd857_29
- bowtie2=2.4.2=py38h1c8e9b9_1
- bwidget=1.9.14=ha770c72_0
- bzip2=1.0.8=h516909a_3
- c-ares=1.11.0=h470a237_1
- ca-certificates=2020.11.8=ha878542_0
- cairo=1.16.0=h9f066cc_1006
- certifi=2020.11.8=py38h578d9bd_0
- colorama=0.4.4=pyh9f0ad1d_0
- curl=7.71.1=he644dc0_8
- cycler=0.10.0=py_2
- dbus=1.13.6=hfdff14a_1
- expat=2.2.9=he1b5a44_2
- fastqc=0.11.9=0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- fontconfig=2.13.1=h7e3eb15_1002
- freetype=2.10.4=h7ca028e_0
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=7.5.0=hda68d29_13
- gcc_linux-64=7.5.0=he2a3fca_29
- gettext=0.19.8.1=hf34092f_1004
- gfortran_impl_linux-64=7.5.0=hfca37b7_17
- gfortran_linux-64=7.5.0=ha081f1e_29
- giflib=5.2.1=h36c2ea0_2
- glib=2.66.3=h58526e2_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.6=hf94e986_0
- gst-plugins-base=1.14.5=h0935bb2_2
- gstreamer=1.14.5=h36ae1b5_2
- gxx_impl_linux-64=7.5.0=h64c220c_13
- gxx_linux-64=7.5.0=h547f3ba_29
- harfbuzz=2.7.2=ha5b49bf_1
- htslib=1.9=h4da6232_3
- icu=67.1=he1b5a44_0
- joblib=0.17.0=py_0
- jpeg=9d=h36c2ea0_0
- kernel-headers_linux-64=2.6.32=h77966d4_13
- kiwisolver=1.3.1=py38h82cb98a_0
- krb5=1.17.2=h926e7f8_0
- lcms2=2.11=hcbb858e_1
- ld_impl_linux-64=2.35.1=hed1e6ac_0
- libblas=3.9.0=3_openblas
- libcblas=3.9.0=3_openblas
- libclang=10.0.1=default_hde54327_1
- libcurl=7.71.1=hcdd3856_8
- libdeflate=1.2=h516909a_1
- libedit=3.1.20191231=h46ee950_2
- libev=4.33=h516909a_1
- libevent=2.1.10=hcdb4288_3
- libffi=3.2.1=he1b5a44_1007
- libgcc-devel_linux-64=9.3.0=hfd08b2a_17
- libgcc-ng=9.3.0=h5dbcf3e_17
- libgfortran-ng=7.5.0=hae1eefd_17
- libgfortran4=7.5.0=hae1eefd_17
- libglib=2.66.3=hbe7bbb4_0
- libgomp=9.3.0=h5dbcf3e_17
- libiconv=1.16=h516909a_0
- liblapack=3.9.0=3_openblas
- libllvm10=10.0.1=he513fc3_3
- libnghttp2=1.41.0=hab1572f_1
- libopenblas=0.3.12=pthreads_hb3c22a3_1
- libpng=1.6.37=h21135ba_2
- libpq=12.3=h5513abc_2
- libssh2=1.9.0=hab1572f_5
- libstdcxx-devel_linux-64=9.3.0=h4084dd6_17
- libstdcxx-ng=9.3.0=h2ae2ef3_17
- libtiff=4.1.0=h4f3a223_6
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h36c2ea0_3
- libxcb=1.13=h14c3975_1002
- libxkbcommon=0.10.0=he1b5a44_0
- libxml2=2.9.10=h68273f3_2
- lz4-c=1.9.2=he1b5a44_3
- make=4.3=hd18ef5c_1
- matplotlib=3.3.2=0
- matplotlib-base=3.3.2=py38h5c7f4ab_1
- mysql-common=8.0.21=2
- mysql-libs=8.0.21=hf3661c5_2
- ncurses=6.1=hf484d3e_1002
- nspr=4.29=he1b5a44_1
- numpy=1.19.4=py38hf0fd68c_1
- olefile=0.46=pyh9f0ad1d_1
- openjdk=11.0.8=hacce0ff_0
- openssl=1.1.1h=h516909a_0
- pandas=1.1.3=py38he6710b0_0
- pango=1.42.4=h69149e4_5
- pcre=8.44=he1b5a44_0
- pcre2=10.35=h279444b_1
- perl=5.32.0=h36c2ea0_0
- pillow=8.0.1=py38h70fbd49_0
- pip=20.2.4=py_0
- pixman=0.40.0=h36c2ea0_0
- pthread-stubs=0.4=h36c2ea0_1001
- pyparsing=2.4.7=pyh9f0ad1d_0
- python=3.8.5=h4d41432_2_cpython
- python-dateutil=2.8.1=py_0
- python_abi=3.8=1_cp38
- pytz=2020.1=py_0
- r=4.0=r40_1004
- r-base=4.0
- r-boot=1.3_25=r40h6115d3f_1
- r-class=7.3_17=r40hcdcec82_1
- r-cluster=2.1.0=r40h31ca83e_4
- r-codetools=0.2_18=r40hc72bb7e_0
- r-foreign=0.8_80=r40hcdcec82_0
- r-kernsmooth=2.23_18=r40h7679c2e_0
- r-lattice=0.20_41=r40hcdcec82_2
- r-mass=7.3_53=r40hcdcec82_0
- r-matrix=1.2_18=r40h7fa42b6_3
- r-mgcv=1.8_33=r40h7fa42b6_0
- r-nlme=3.1_150=r40h31ca83e_0
- r-nnet=7.3_14=r40hcdcec82_1
- r-recommended=4.0=r40_1004
- r-rpart=4.1_15=r40hcdcec82_2
- r-spatial=7.3_12=r40hcdcec82_1
- r-survival=3.2_7=r40hcdcec82_0
- readline=8.0=h46ee950_1
- samtools=1.9=h10a08f8_12
- scikit-learn=0.23.2=py38h0573a6f_0
- scipy=1.5.3=py38h828c644_0
- seaborn=0.11.0=py_0
- sed=4.8=he412f7d_0
- setuptools=49.6.0=py38h924ce5b_2
- six=1.15.0=pyh9f0ad1d_0
- sqlite=3.32.3=hcee41ef_1
- sysroot_linux-64=2.12=h77966d4_13
- tbb=2020.2=hc9558a2_0
- termcolor=1.1.0=py_2
- terminaltables=3.1.0=py_0
- threadpoolctl=2.1.0=pyh5ca1d4c_0
- tk=8.6.10=hed695b0_1
- tktable=2.10=hb7b940f_3
- tornado=6.1=py38h25fe258_0
- wheel=0.35.1=pyh9f0ad1d_0
- xorg-fixesproto=5.0=h14c3975_1002
- xorg-inputproto=2.3.2=h14c3975_1002
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.12=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxfixes=5.0.3=h516909a_1004
- xorg-libxi=1.7.10=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxtst=1.2.3=h516909a_1002
- xorg-recordproto=1.14.2=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_1
- zlib=1.2.11=h516909a_1010
- zstd=1.4.5=h6597ccf_2
prefix: /root/anaconda3/envs/seqQscorer