-
Notifications
You must be signed in to change notification settings - Fork 1
/
dot_emacs
1081 lines (979 loc) · 33.4 KB
/
dot_emacs
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
;; -*- emacs-lisp -*-
;; (setq debug-on-error t)
(require 'package)
(setq package-enable-at-startup nil)
(add-to-list 'package-archives '("melpa" . "http://melpa.org/packages/"))
(let ((default-directory "~/.emacs.d/lisp/"))
(normal-top-level-add-subdirs-to-load-path))
(package-initialize)
;; Bootstrap `use-package'
(unless (package-installed-p 'use-package)
(package-refresh-contents)
(package-install 'use-package))
(eval-when-compile
(require 'use-package))
;;; General emacs configuration
(use-package emacs
:init ; executed before package is loaded
(fset 'yes-or-no-p 'y-or-n-p)
(put 'narrow-to-region 'disabled nil)
:hook ; add functions onto hook; only basename needed
((text-mode . turn-on-auto-fill)
(before-save . whitespace-cleanup))
:bind ; key bindings
(("C-x a r" . align-regexp))
:config ; executed after package is loaded
(defadvice ; align-regexp should use spaces.
align-regexp
(around align-regexp-with-spaces activate)
(let ((indent-tabs-mode nil)) ad-do-it))
:custom
(inhibit-startup-screen t)
(default-input-method "TeX")
(user-full-name "Ryan Kavanagh")
(user-mail-address "[email protected]")
:custom-face
(default ((t (:family "Iosevka")))))
(if (string= (system-name) "demeter.rak.ac")
(use-package leuven-theme ; nice theme for lecturing / projectors
:ensure t
:config
(load-theme 'leuven t))
(use-package moe-theme
:ensure t
:after powerline ; must be loaded after for powerline-moe-theme to work
:config
(moe-dark)
(moe-theme-powerline)))
(defun single-lines-only ()
"Replace multiple blank lines with a single one"
(interactive)
(goto-char (point-min))
(while (re-search-forward "\\(^\\s-*$\\)\n" nil t)
(replace-match "\n")
(forward-char 1)))
(use-package ace-window
:ensure t
:custom
;; home row keys
(aw-keys '(?h ?t ?n ?s ?a ?o ?e ?u ?i ?d))
:bind (("M-o" . ace-window))
:config
;; need to redefine a few of these because the defaults
;; overlap with customized aw-keys
(setq aw-dispatch-alist
'((?x aw-delete-window "Delete Window")
(?m aw-swap-window "Swap Windows")
(?M aw-move-window "Move Window")
(?c aw-copy-window "Copy Window")
(?j aw-switch-buffer-in-window "Select Buffer")
(?f aw-flip-window)
(?p aw-switch-buffer-other-window "Switch Buffer Other Window")
(?c aw-split-window-fair "Split Fair Window")
(?v aw-split-window-vert "Split Vert Window")
(?b aw-split-window-horz "Split Horz Window")
(?1 delete-other-windows "Delete Other Windows")
(?? aw-show-dispatch-help))))
(use-package aggressive-indent
:ensure t
:config
(global-aggressive-indent-mode 1))
(use-package autorevert
:diminish auto-revert-mode)
(use-package avy
:ensure t
:config
(avy-setup-default)
:bind
(("C-c C-j" . avy-resume)
("C-;" . avy-goto-char)))
(use-package beluga-mode
:mode "\\.bel\'")
(use-package bibtex
:mode ("\\.bib\'" . bibtex-mode)
:custom
(bibtex-dialect 'biblatex)
(bibtex-maintain-sorted-entries 'crossref)
;; Use only the first author name if there are more than 2 authors
(bibtex-autokey-names 1)
;; Otherwise use both names
(bibtex-autokey-names-stretch 1)
(bibtex-autokey-name-separator "_")
(bibtex-autokey-name-year-separator "_")
(bibtex-autokey-year-length 4)
(bibtex-autokey-year-title-separator ":_")
(bibtex-autokey-titleword-length 5)
(bibtex-autokey-titlewords 3)
;; Make all title words lowercase
(bibtex-autokey-preserve-case 1)
:bind (:map bibtex-mode-map
("C-c C-c" . org-ref-clean-bibtex-entry)
("C-c s" . bibtex-sort-buffer))
:config
(defun my/bibtex-generate-autokey (autogenerated)
(let ((key (bibtex-autokey-get-field "_key")))
(if (string= "" key) autogenerated key)))
(advice-add 'bibtex-generate-autokey :filter-return #'my/bibtex-generate-autokey)
;; stolen from bibtex.el and modified to handle "Mac Lane"
(defun my/bibtex-autokey-demangle-name (fullname)
"Get the last part from a well-formed FULLNAME and perform abbreviations."
(let* (case-fold-search
(name (cond ((string-match "\\(\\(Ma?c\\|De\\) +[[:upper:]][^, ]*\\)[^,]*," fullname)
;; Name is of the form "Mac Last, First" or
;; "Mac Last, Jr, First" or "Mc Last, First" or
;; "Mc Last, Jr, First"
;; --> Take Mac Last or Mc Last, as appropriate
;; and replace spaces by concatenation
(let ((mclast (match-string 1 fullname)))
(when (string-match split-string-default-separators mclast)
(replace-match "" nil nil mclast))))
((string-match "\\([[:upper:]][^, ]*\\)[^,]*," fullname)
;; Name is of the form "von Last, First" or
;; "von Last, Jr, First"
;; --> Take the first capital part before the comma
(match-string 1 fullname))
((string-match "\\([^, ]*\\)," fullname)
;; Strange name: we have a comma, but nothing capital
;; So we accept even lowercase names
(match-string 1 fullname))
((string-match "\\(\\<[[:lower:]][^ ]* +\\)+\\([[:upper:]][^ ]*\\)"
fullname)
;; name is of the form "First von Last", "von Last",
;; "First von von Last", or "d'Last"
;; --> take the first capital part after the "von" parts
(match-string 2 fullname))
((string-match "\\([^ ]+\\) *\\'" fullname)
;; name is of the form "First Middle Last" or "Last"
;; --> take the last token
(match-string 1 fullname))
(t (error "Name `%s' is incorrectly formed" fullname)))))
(funcall bibtex-autokey-name-case-convert-function
(bibtex-autokey-abbrev name bibtex-autokey-name-length))))
(advice-add 'bibtex-autokey-demangle-name :override 'my/bibtex-autokey-demangle-name)
;; Until https://debbugs.gnu.org/cgi/bugreport.cgi?bug=36252 gets fixed
(defun bibtex-autokey-get-year ()
"Return year field contents as a string obeying `bibtex-autokey-year-length'.
If the year field is absent, extract the year from a valid ISO8601-2
Extended Format date in the date field and return it as a string obeing
`bibtex-autokey-year-length'."
(let ((yearfield (bibtex-autokey-get-field "year"))
(datefield (bibtex-autokey-get-field "date"))
(shortener (lambda (year)
(substring year (max 0 (- (length year)
bibtex-autokey-year-length))))))
(if (string= "" yearfield)
(cond ((string-match "[./]*\\(-?[[:digit:]]+X*\\)\\([-/.[:digit:]:T~?%X]*\\)"
datefield)
;; Matches ISO8601-2 Extended Format specification level 1
;; examples listed in tables 3, 4, and 5 on pp. 38-40 of the
;; biblatex package manual, version 3.12
(funcall shortener (match-string 1 datefield)))
(t (error "Date field `%s' is incorrectly formed" datefield)))
(funcall shortener yearfield))))
;; Don't have accented characters in keys
(let ((charMap '(;; This list based on Xah Lee's http://ergoemacs.org/emacs/emacs_zap_gremlins.html
;; Case-sensitivity (see bibtex-autokey-name-change-strings) requires us to
;; duplicate everything
("ß" . "ss")
("á\\|à\\|â\\|ä\\|ā\\|ǎ\\|ã\\|å\\|ą\\|ă\\|ạ\\|ả\\|ả\\|ấ\\|ầ\\|ẩ\\|ẫ\\|ậ\\|ắ\\|ằ\\|ẳ\\|ặ" . "a")
("æ" . "ae")
("ç\\|č\\|ć" . "c")
("é\\|è\\|ê\\|ë\\|ē\\|ě\\|ę\\|ẹ\\|ẻ\\|ẽ\\|ế\\|ề\\|ể\\|ễ\\|ệ" . "e")
("í\\|ì\\|î\\|ï\\|ī\\|ǐ\\|ỉ\\|ị" . "i")
("ñ\\|ň\\|ń" . "n")
("ó\\|ò\\|ô\\|ö\\|õ\\|ǒ\\|ø\\|ō\\|ồ\\|ơ\\|ọ\\|ỏ\\|ố\\|ổ\\|ỗ\\|ộ\\|ớ\\|ờ\\|ở\\|ợ" . "o")
("ú\\|ù\\|û\\|ü\\|ū\\|ũ\\|ư\\|ụ\\|ủ\\|ứ\\|ừ\\|ử\\|ữ\\|ự" . "u")
("ý\\|ÿ\\|ỳ\\|ỷ\\|ỹ" . "y")
("þ" . "th")
("ď\\|ð\\|đ" . "d")
("ĩ" . "i")
("ľ\\|ĺ\\|ł" . "l")
("ř\\|ŕ" . "r")
("š\\|ś" . "s")
("ť" . "t")
("ž\\|ź\\|ż" . "z")
("œ" . "oe")
(" " . " ") ; thin space etc
("–" . "-")
("—\\|一" . "--"))))
;; For some reason, *-name-* and *-titleword-* get clobbered, even
;; though the original value in decribe-variable clearly shows
;; them having been based on the extended
;; bibtex-autokey-transcriptions. Force them to be the right
;; thing.
(progn (seq-do (lambda (pair) (add-to-list 'bibtex-autokey-transcriptions pair)) charMap)
(seq-do (lambda (pair) (add-to-list 'bibtex-autokey-name-change-strings pair)) charMap)
(seq-do (lambda (pair) (add-to-list 'bibtex-autokey-titleword-change-strings pair)) charMap))))
(use-package bibtex-completion
:ensure ivy-bibtex
:custom
(bibtex-completion-bibliography "~/Documents/papers/library.bib")
(bibtex-completion-library-path '("~/Documents/papers/pdfs/"))
(bibtex-completion-notes-path "~/Documents/papers/notes/")
(bibtex-completion-notes-extension ".org")
(bibtex-completion-pdf-extension '(".pdf" ".djvu" ".txt")))
(use-package cc-mode
:custom
(c-default-style "bsd"))
(use-package company
:ensure t
:diminish
:bind
("<tab>" . company-indent-or-complete-common)
:hook
(after-init . global-company-mode))
(use-package company-auctex
:ensure t
:after latex
:config
(company-auctex-init))
(use-package company-bibtex
:ensure t
:hook
(bibtex-mode . (lambda () (add-to-list 'company-backends 'company-bibtex))))
(use-package company-box
:ensure t
:diminish
:hook (company-mode . company-box-mode))
(use-package company-coq
:ensure t
:hook (coq-mode . company-coq-mode))
(use-package company-math
:ensure t
:config
(add-to-list 'company-backends 'company-math-symbols-unicode)
(add-to-list 'company-backends 'company-latex-commands))
(use-package company-org-block
:ensure t
:hook ((org-mode . (lambda ()
(setq-local company-backends '(company-org-block))
(company-mode +1)))))
(use-package counsel
:ensure t
:bind
(("C-x b" . counsel-switch-buffer)
("C-x C-b" . counsel-ibuffer)
("C-x C-f" . counsel-find-file)
("M-x" . counsel-M-x)
("M-y" . counsel-yank-pop)
("<f2> i" . counsel-info-lookup-symbol)
("<f2> j" . counsel-set-variable)
("<f2> u" . counsel-unicode-char))
:config
(add-to-list 'ivy-initial-inputs-alist
'(counsel-M-x . "")))
(use-package csv-mode
:ensure t)
(use-package cus-edit
:custom
(custom-file null-device "Don't store customizations"))
(use-package diary
:ensure diary-lib
:custom
(diary-display-function 'diary-fancy-display)
:hook ((diary-list-entries . diary-include-other-diary-files)
(diary-list-entries . diary-sort-entries)))
(use-package dictem)
(use-package diminish
:ensure t)
(use-package doi-utils
;; provided by org-ref
:ensure org-ref)
(use-package dtrt-indent
:ensure t)
(use-package dune
:ensure t)
(use-package dune-format
:ensure t)
(use-package eldoc
:diminish)
(use-package elpher
:ensure t)
(use-package elpy
:ensure t
:after python
:config (elpy-enable)
:custom
(elpy-rpc-python-command "python3"))
(use-package ess
:ensure t)
(use-package fill-column-indicator
:ensure t)
(use-package flyspell
:bind
(("<f12>" . flyspell-auto-correct-previous-word))
:config
(unbind-key "C-;" flyspell-mode-map))
(use-package flyspell-correct-ivy
:ensure t
:after flyspell
:bind
("C-<f12>" . flyspell-correct-wrapper)
:config
(setq flyspell-correct-interface #'flyspell-correct-ivy))
(use-package gnus
:ensure t
:defer t
:bind
;; (:map gnus-summary-buffer-map
;; ("SPC" . (gnus-summary-goto-next-page)
:custom
(gnus-select-method
'(nntp "news.club.cc.cmu.edu"
(nntp-address "news.club.cc.cmu.edu")
(nntp-via-address "news-cclub")
(nntp-via-rlogin-command "ssh")
(nntp-open-connection-function nntp-open-via-rlogin-and-netcat)))
(gnus-home-score-file "gnus.SCORE")
(gnus-secondary-select-methods
'((nntp "news.gmane.io")
(nnimap "imap.rak.ac")
(nnimap "mail.cs.mcgill.ca")))
(gnus-parameters
'(("^nntp+.*" (address . "[email protected]"))
("^nnimap+imap\\.rak\\.ac:.*"
(posting-style
(address . "[email protected]")
(gcc "nnimap+imap.rak.ac:Sent")))
("^nnimap+mail\\.cs\\.mcgill\\.ca:.*"
(posting-style
(address . "[email protected]")
(gcc "nnimap+mail.cs.mcgill.ca:INBOX.Sent")))))
(gnus-cloud-method "nnimap:imap.rak.ac")
(gnus-cloud-storage-method 'base64)
(gnus-cloud-synced-files
'("~/.newsrc" "~/.newsrc.eld" (:directory "~/News" :match ".*.SCORE\\'")))
(gnus-update-message-archive-method t)
(gnus-message-archive-method
'(nnfolder "archive" ; this gets included in the server buffer
(nnfolder-inhibit-expiry t)
(nnfolder-get-new-mail nil)
(nnfolder-active-file "~/News/sent/active")
(nnfolder-directory "~/News/sent")))
(gnus-check-new-newsgroups nil)
(gnus-group-line-format "%M%S%p%P%5y:%B%(%G%) %z\n")
(gnus-topic-display-empty-topics nil)
(gnus-posting-styles
'((".*"
(signature-file "~/.signature"))))
:hook
(message-send . gnus-score-followup-article)
(gnus-group-mode . gnus-topic-mode))
(use-package haskell-mode
:ensure t
:hook ((haskell-mode . turn-on-haskell-doc-mode)
(haskell-mode . turn-on-haskell-indentation)))
(use-package info-look
:ensure t)
(use-package ispell
:ensure t
:defer t
:custom
(ispell-dictionary "en_CA-w_accents"))
(use-package ivy
:ensure t
:diminish
:bind
(("C-c v" . ivy-push-view)
("C-c V" . ivy-pop-view)
("C-c C-r" . ivy-resume))
:custom
(ivy-use-virtual-buffers t)
(ivy-count-format "(%d/%d) ")
:config
(ivy-mode 1))
(use-package ivy-bibtex
:ensure t
:bind (("C-c b" . ivy-bibtex)))
(use-package ivy-hydra
:ensure t)
(use-package latex
:ensure auctex
:after info-look
:mode ("\\.tex\\'" . LaTeX-mode)
:init
;; http://www.cs.au.dk/~abizjak/emacs/2016/03/06/latex-fill-paragraph.html
(defun ales/fill-paragraph (&optional P)
"When called with prefix argument call `fill-paragraph'.
Otherwise split the current paragraph into one sentence per line."
(interactive "P")
(if (not P)
(save-excursion
(let ((fill-column 12345678)) ;; relies on dynamic binding
(fill-paragraph) ;; this will not work correctly if the paragraph is
;; longer than 12345678 characters (in which case the
;; file must be at least 12MB long. This is unlikely.)
(let ((end (save-excursion
(forward-paragraph 1)
(backward-sentence)
(point-marker)))) ;; remember where to stop
(beginning-of-line)
(while (progn (forward-sentence)
(<= (point) (marker-position end)))
(just-one-space) ;; leaves only one space, point is after it
(delete-char -1) ;; delete the space
(newline) ;; and insert a newline
(LaTeX-indent-line) ;; I only use this in combination with late, so this makes sense
))))
;; otherwise do ordinary fill paragraph
(fill-paragraph P)))
:hook
((LaTeX-mode . turn-on-reftex)
(LaTeX-mode . turn-off-auto-fill)
(LaTeX-mode . turn-on-flyspell)
(LaTeX-mode . LaTeX-math-mode)
(LaTeX-mode . (lambda () (set (make-local-variable 'TeX-electric-math)
(cons "\\(" "\\)"))))
(LaTeX-mode . (lambda ()
(LaTeX-add-environments
'("axiom" LaTeX-env-label)
'("theorem" LaTeX-env-label)
'("proposition" LaTeX-env-label)
'("definition" LaTeX-env-label)
'("corollary" LaTeX-env-label)
'("lemma" LaTeX-env-label)
'("example" LaTeX-env-label)
'("conjecture" LaTeX-env-label)
'("figure" LaTeX-env-label))))
(LaTeX-mode . (lambda ()
;; This must be a hook. Trying to set it in :config
;; causes the variable to become buffer-local, so
;; it never actually takes effect in all
;; latex-moded buffers. So much time wasted debugging.
(add-to-list 'LaTeX-label-alist '("axiom" . "ax:"))
(add-to-list 'LaTeX-label-alist '("conjecture" . "conj:"))
(add-to-list 'LaTeX-label-alist '("corollary" . "cor:"))
(add-to-list 'LaTeX-label-alist '("definition" . "def:"))
(add-to-list 'LaTeX-label-alist '("proposition" . "prop:"))
(add-to-list 'LaTeX-label-alist '("theorem" . "theorem:"))
(add-to-list 'LaTeX-label-alist '("example" . "ex:"))
(add-to-list 'LaTeX-label-alist '("lemma" . "lemma:"))
(add-to-list 'LaTeX-label-alist '("figure" . "fig:")))))
:config
(info-lookup-add-help :mode 'LaTeX-mode
:regexp ".*"
:parse-rule "\\\\?[a-zA-Z]+\\|\\\\[^a-zA-Z]"
:doc-spec '(("(latex2e)Concept Index")
("(latex2e)Command Index")))
:bind
(:map LaTeX-mode-map
("M-q" . ales/fill-paragraph)))
(use-package libmpdel
;; used by mpdel to connect to mpd
:custom
(libmpdel-hostname "asteria.home.arpa"))
(use-package magit
:ensure t
:config
(put 'magit-clean 'disabled nil)
:custom
(magit-diff-refine-hunk 'all))
(use-package markdown-mode
:ensure t
:init
(autoload 'markdown-mode "markdown-mode"
"Major mode for editing Markdown files" t)
:hook ((markdown-mode . (lambda ()
(setq-default indent-tabs-mode nil)
(setq-default whitespace-style nil))))
:mode (("\\.markdown\\'" . markdown-mode)
("\\.mdown\'" . markdown-mode)))
(use-package menu-bar
:config
(menu-bar-mode -1)
:bind
([S-f10] . menu-bar-mode))
(use-package merlin
;; ocaml assistant
:ensure t)
(use-package message
:config
(defun message-whitespace-cleanup ()
"Clean whitespace in message-mode
Runs whitespace-cleanup on a message body and signature,
while also preserving the space at the end of the '-- '
delimiter between body and signature.
This function is dumb and implicitly assumes the existence
of a delimiter."
(interactive)
(save-excursion
(save-restriction
(widen)
(let ((body-min
(progn
(message-goto-body)
(point)))
(body-max
(progn
(message-goto-signature)
(previous-line)
(point)))
(signature-min
(progn
(message-goto-signature)
(point)))
(whitespace-style '(trailing)))
(progn
(narrow-to-region body-min body-max)
(whitespace-cleanup)
(widen)
(narrow-to-region signature-min (point-max))
(whitespace-cleanup))))))
:hook
((message-mode . (lambda () (remove-hook 'before-save-hook 'whitespace-cleanup t)))
(message-mode . (lambda () (add-hook 'before-save-hook 'message-whitespace-cleanup nil t))))
:custom
(message-citation-line-function 'message-insert-formatted-citation-line)
(message-send-mail-function 'message-send-mail-with-sendmail))
(use-package minibuffer
:config
(add-to-list 'completion-styles 'substring)
:custom
;; Cycle through tab-completions with tab if there are less than 5
(completion-cycle-threshold 5))
(use-package mpc
;; mpd client
:custom
(mpc-host "asteria.home.arpa"))
(use-package mpdel
;; mpd client
;; host/port customization under libmpdel package
:ensure t
:diminish
:config
(mpdel-mode))
(use-package ocp-indent
:ensure t)
(use-package octave
:mode ("\\.m\'" . octave-mode))
(use-package org
:bind (:map org-mode-map
("<tab>" . org-cycle))
:hook
(org-mode . visual-line-mode)
:custom
(org-link-file-path-type 'relative))
(use-package org-chef
:ensure t)
(use-package org-noter
:ensure t
:custom
;; Surely there's an easier way of setting this?
(org-noter-notes-search-path '("~/Documents/papers/notes/")))
(use-package org-ref
:ensure t
:after ivy-bibtex)
(use-package org-ref-arxiv
:ensure org-ref
:custom
(arxiv-entry-format-string "@Misc{%s,
title = {%s},
author = {%s},
eprinttype = {arxiv},
date = {%s},
eprint = {%s},
eprintclass = {%s},
abstract = {%s},
pagetotal = {MISSING},
_checked = {NOT CHECKED},
_source = {ev},
}")
;; redefine it to use a sensible date and stuff.
;; my version of arxiv-get-bibtex-entry-via-arxiv-api
:config
(defun my/arxiv-get-bibtex-entry-via-arxiv-api (arxiv-number)
"Retrieve meta data for ARXIV-NUMBER.
Returns a formatted BibTeX entry."
(with-current-buffer
(url-retrieve-synchronously (format "http://export.arxiv.org/api/query?id_list=%s" arxiv-number) t)
(let* ((parse-tree (libxml-parse-xml-region
(progn (goto-char 0)
(search-forward "<?xml ")
(match-beginning 0))
(point-max)))
(entry (assq 'entry parse-tree))
(authors (--map (nth 2 (nth 2 it))
(--filter (and (listp it) (eq (car it) 'author)) entry)))
(date (nth 2 (assq 'published entry)))
(title (nth 2 (assq 'title entry)))
(names (arxiv-bibtexify-authors authors))
(category (cdar (nth 1 (assq 'primary_category entry))))
(abstract (s-trim (nth 2 (assq 'summary entry))))
(url (nth 2 (assq 'id entry)))
(temp-bibtex (format arxiv-entry-format-string "" title names date arxiv-number category abstract url))
(key (with-temp-buffer
(insert temp-bibtex)
(bibtex-mode)
(bibtex-set-dialect (parsebib-find-bibtex-dialect) t)
(org-ref-replace-nonascii)
(bibtex-generate-autokey))))
(format arxiv-entry-format-string key title names date arxiv-number category abstract url))))
(advice-add 'arxiv-get-bibtex-entry-via-arxiv-api :override 'my/arxiv-get-bibtex-entry-via-arxiv-api))
(use-package org-ref-bibtex
:ensure org-ref
:after bibtex-completion ; needs bibtex-completion-library-path
:custom
(org-ref-title-case-types '(("article" "title")
("book" "booktitle" "title")
("collection" "booktitle" "title")
("incollection" "booktitle" "title")
("inproceedings" "booktitle" "title")
("misc" "title")
("proceedings" "title")
("report" "title")
("thesis" "title")))
(org-ref-bibtex-journal-abbreviations
'(("CACM" "Communications of the ACM" "Comm. ACM")
("Discourse \\& Society")
("ENTCS" "Electronic Notes in Theoretical Computer Science")
("Information and Computation")
("International Journal of Foundations of Computer Science" "Int. J. Found. Comput. Sci.")
("JSL" "The Journal of Symbolic Logic")
("Journal of Computer Security")
("Journal of Logic and Computation" "J. Logic Computat.")
("LCNS" "Lecture Notes in Computer Science" "Lect. Notes Comput. Sc.")
("LMCS" "Logical Methods in Computer Science")
("Le Devoir")
("MSCS" "Mathematical Structures in Computer Science" "Math. Struct. Comp. Sci.")
("Nordic Journal of Philosophical Logic")
("PACMPL" "Proceedings of the ACM on Programming Languages" "Proc. ACM Program. Lang.")
("Philosophy Compass")
("Piping Today")
("Proceedings of the Aristotelian Society")
("Publications of the Research Institute for Mathematical Sciences" "Publ. RIMS")
("Reason Papers")
("Reprints in Theory and Applications of Categories")
("Rice University Studies")
("Rice University Studies")
("SICOMP" "SIAM Journal on Computing")
("Science")
("TAC" "Theory and Applications of Categories")
("TCS" "Theoretical Computer Science")
("TUGboat")
("The American Mathematical Monthly")
("The Review of Symbolic Logic")
("The Voice")
("Topoi")
("Transactions of the American Mathematical Society")
("{ACM} {SIGACT} News" "ACM SIGACT News"))))
(use-package prog-mode
:hook
((prog-mode . flyspell-prog-mode)))
(use-package reftex-cite
:ensure t)
(use-package org-ref-core
:ensure org-ref
:after org-ref-bibtex
:after reftex-cite
:after ivy-bibtex
:bind (:map bibtex-mode-map
("C-c C-c" . org-ref-clean-bibtex-entry)
("C-c e" . my/set-source-ev)
("C-c d" . my/set-checked-date))
:config
(defun my/org-ref-title-case-english ()
"Call org-ref-title-case only if the language field is set
to `english' or is missing. This will avoid having foreign-
language titles re-cased."
(interactive)
(let ((langfield (bibtex-autokey-get-field "language")))
(if (= (length langfield) 0)
(org-ref-title-case))))
(defun my/set-checked-date ()
"Set the _checked field of a bibtex entry to the current date."
(interactive)
(save-excursion
(bibtex-beginning-of-entry)
(bibtex-set-field "_checked" (format-time-string "%Y-%m-%d"))))
(defun my/set-source-ev ()
"Set the _source field of a bibtex entry to ev."
(interactive)
(save-excursion
(bibtex-beginning-of-entry)
(bibtex-set-field "_source" "ev")))
;; taken from org-ref-bibtex.el and extended
(setq org-ref-nonascii-latex-replacements
(append '(("fi" . "fi")
("ı́" . "{\\\\'i}")
("ω" . "$\\\\omega$")
("‘" . "`") ; LEFT SINGLE QUOTATION MARK
("’" . "'") ; RIGHT SINGLE QUOTATION MARK
("“" . "``")
("′" . "'") ; PRIME
("∇" . "$\\\\nabla$")
("ι" . "$\\\\iota$")
("”" . "''"))
org-ref-nonascii-latex-replacements))
(defun my/org-ref-format-url-if-doi ()
"Override built-in function. Originally, this reformatted
the url to point to DOI. I would rather kill the URL field
entirely if it contains the DOI. bibtex-clean-entry will then
delete the field."
(interactive)
(save-excursion
(bibtex-beginning-of-entry)
(let ((doi (bibtex-autokey-get-field "doi")))
(unless (string-empty-p doi)
(when (string-match-p (regexp-quote (org-ref-bibtex-entry-doi))
(bibtex-autokey-get-field "url"))
(bibtex-set-field "url" ""))))))
(defun my/org-ref-biblatex-journaltitle ()
"Rename journal to journaltitle"
(interactive)
(save-excursion
(bibtex-beginning-of-entry)
(let ((journal (bibtex-autokey-get-field "journal"))
(journaltitle (bibtex-autokey-get-field "journaltitle")))
(when (and (string-empty-p journaltitle)
(not (string-empty-p journal)))
(bibtex-beginning-of-entry)
(bibtex-set-field "journal" "")
(bibtex-set-field "journaltitle" journal)))))
(defun my/biblatex-date ()
"Convert 'year' + 'month' fields to 'date' field"
(interactive)
(save-excursion
(bibtex-beginning-of-entry)
(let* ((year (bibtex-autokey-get-field "year"))
(month (downcase (bibtex-autokey-get-field "month")))
(nummonth (cond ((string= month "jan") "01")
((string= month "feb") "02")
((string= month "mar") "03")
((string= month "apr") "04")
((string= month "may") "05")
((string= month "jun") "06")
((string= month "jul") "07")
((string= month "aug") "08")
((string= month "sep") "09")
((string= month "oct") "10")
((string= month "nov") "11")
((string= month "dec") "12")
(t "")))
(olddate (bibtex-autokey-get-field "date"))
(newdate (cond ((string-empty-p year) nil)
((string-empty-p nummonth) year)
(t (concat year "-" nummonth)))))
(when (and (string-empty-p olddate)
(not (string-empty-p newdate)))
(bibtex-beginning-of-entry)
(bibtex-set-field "date" newdate)
(bibtex-set-field "year" "")
(bibtex-set-field "month" "")))))
(defun my/orcb-check-journal ()
"Check entry at point to see if journal exists in `org-ref-bibtex-journal-abbreviations'.
If not, issue a warning."
(interactive)
(when
(string= "article"
(downcase
(cdr (assoc "=type=" (bibtex-parse-entry)))))
(save-excursion
(bibtex-beginning-of-entry)
(let* ((entry (bibtex-parse-entry t))
(journal (replace-regexp-in-string "[[:space:]\n]+" " " (reftex-get-bib-field "journaltitle" entry))))
(when (null journal)
(error "Unable to get journal for this entry."))
(unless (member journal (-flatten org-ref-bibtex-journal-abbreviations))
(message "Journal \"%s\" not found in org-ref-bibtex-journal-abbreviations." journal))))))
:custom
(org-ref-default-bibliography '("~/Documents/papers/library.bib"))
(org-ref-bibliography-notes "~/Documents/papers/notes.org")
(org-ref-pdf-directory "~/Documents/papers/pdfs/")
;; don't fudge with the output of bibtex-generate-autokey
(org-ref-clean-bibtex-key-function 'identity)
;; let helm-bibtex find the notes file for an entry
(org-ref-notes-function
(lambda (thekey)
(let ((bibtex-completion-bibliography (org-ref-find-bibliography)))
(bibtex-completion-edit-notes
(list (car (org-ref-get-bibtex-key-and-file thekey)))))))
(org-ref-clean-bibtex-entry-hook
'(my/org-ref-biblatex-journaltitle
bibtex-clean-entry
my/org-ref-format-url-if-doi
orcb-key-comma
org-ref-replace-nonascii
orcb-&
orcb-%
my/org-ref-title-case-english ;; all entries, -article does only articles
my/org-ref-biblatex-journaltitle
my/biblatex-date
orcb-key
orcb-clean-doi
my/orcb-check-journal
org-ref-sort-bibtex-entry
orcb-fix-spacing
orcb-clean-nil-opinionated)))
(use-package org-ref-isbn
:ensure org-ref)
(use-package org-ref-pdf
:ensure org-ref)
(use-package ox-md
;; org-mode to markdown exporter
:ensure org
:after (org))
(use-package outline
:ensure t
:hook (LaTeX-mode . outline-minor-mode))
(use-package outline-magic
:ensure t
:after outline
:bind (:map outline-minor-mode-map ([f10] . outline-cycle)))
(use-package paren
:ensure t
:config
(show-paren-mode t)
:custom
;; highlight entire expression when on delimiters
(show-paren-style 'expression))
(use-package pdf-tools
:ensure t
:config
(pdf-tools-install))
(use-package pdf-view
:bind
(:map pdf-view-mode-map
("C-s" . isearch-forward)))
(use-package powerline
:ensure t)
(use-package proof-general
:ensure t
:custom
(proof-disappearing-proofs t)
(proof-electric-terminator-enable t)
(proof-three-window-enable t)
(proof-three-window-mode-policy 'hybrid)
:custom-face
(proof-locked-face ((t (:weight bold)))))
(use-package py-autopep8
:ensure t
:hook (python-mode . py-autopep8-enable-on-save)
:custom
(py-autopep8-options '("--max-line-length=80")))
(use-package python
:ensure t
:mode ("\\.py\\'" . python-mode)
:custom (python-python-command "/usr/bin/python3")
:interpreter ("python3" . python-mode)
:custom
(python-indent-guess-indent-offset nil)
(python-indent-offset 4)
(python-shell-interpreter "python3"))
(use-package rainbow-delimiters
:ensure t
:hook ((LaTeX-mode prog-mode) . rainbow-delimiters-mode))
(use-package rainbow-mode
:ensure t)
(use-package reftex
:ensure t
:after latex
:hook (LaTeX-mode . reftex-mode)
:custom
(reftex-default-bibliography '("~/Documents/papers/library.bib"))
(reftex-label-alist '(("axiom" ?a "ax:%f:" "~\\ref{%s}" t ("axiom" "ax.") -3)
("theorem" ?h "theorem:%F:" "~\\ref{%s}" t ("theorem" "th.") -3)
("proposition" ?p "prop:%F:" "~\\ref{%s}" t ("proposition" "prop.") -3)
("definition" ?d "def:%F:" "~\\ref{%s}" t ("definition" "def.") -3)
("corollary" ?c "cor:%F:" "~\\ref{%s}" t ("corollary" "cor.") -3)
("lemma" ?l "lemma:%F:" "~\\ref{%s}" t ("lemma" "lem.") -3)
("conjecture" ?j "conj:%F:" "~\\ref{%s}" t ("conjecture" "conj.") -3)
("example" ?X "ex:%F:" "~\\ref{%s}" t ("example" "ex.") -3)
("figure" ?F "fig:%F:" "~\\ref{%s}" t ("figure" "fig.") -3)
("ax" ?a "ax:%F:" "~\\ref{%s}" t ("axiom" "ax.") -3)
("thm" ?h "theorem:%F:" "~\\ref{%s}" t ("theorem" "th.") -3)
("prop" ?p "prop:%F:" "~\\ref{%s}" t ("proposition" "prop.") -3)
("defi" ?d "def:%F:" "~\\ref{%s}" t ("definition" "def.") -3)
("cor" ?c "cor:%F:" "~\\ref{%s}" t ("corollary" "cor.") -3)
("lem" ?l "lemma:%F:" "~\\ref{%s}" t ("lemma" "lem.") -3)
("conj" ?j "conj:%F:" "~\\ref{%s}" t ("conjecture" "conj.") -3)
("enumerate" 105 "item:%F:" "~\\ref{%s}" item (regexp "items?" "Punkte?"))
("equation" 101 "eq:%F:" "~\\eqref{%s}" t
(regexp "equations?" "eqs?\\." "eqn\\." "Gleichung\\(en\\)?" "Gl\\."))
("eqnarray" 101 "eq:%F:" nil eqnarray-like))))
(use-package sass-mode
:ensure t)
(use-package scroll-bar
:custom
(scroll-bar-mode nil))
(use-package sendmail
:custom
(mail-specify-envelope-from t)
(mail-envelope-from 'header))
(use-package simple
:custom
(column-mode-number t))
(use-package smerge-mode
:commands smerge-mode
:init ;; weirdly won't work if under custom
(setq smerge-command-prefix (kbd "C-c v")))
(use-package sml-mode
:ensure t
:mode ("\\.sml\\'" . sml-mode))