graph_unet.py

import os.path as osp

import torch
import torch.nn.functional as F

from torch_geometric.datasets import Planetoid
from torch_geometric.nn import GraphUNet
from torch_geometric.utils import dropout_edge

dataset = 'Cora'
path = osp.join(osp.dirname(osp.realpath(__file__)), '..', 'data', dataset)
dataset = Planetoid(path, dataset)
data = dataset[0]


class Net(torch.nn.Module):
    def __init__(self):
        super().__init__()
        pool_ratios = [2000 / data.num_nodes, 0.5]
        self.unet = GraphUNet(dataset.num_features, 32, dataset.num_classes,
                              depth=3, pool_ratios=pool_ratios)

    def forward(self):
        edge_index, _ = dropout_edge(data.edge_index, p=0.2,
                                     force_undirected=True,
                                     training=self.training)
        x = F.dropout(data.x, p=0.92, training=self.training)

        x = self.unet(x, edge_index)
        return F.log_softmax(x, dim=1)


device = 'cuda' if torch.cuda.is_available() else 'cpu'
model, data = Net().to(device), data.to(device)
optimizer = torch.optim.Adam(model.parameters(), lr=0.01, weight_decay=0.001)


def train():
    model.train()
    optimizer.zero_grad()
    F.nll_loss(model()[data.train_mask], data.y[data.train_mask]).backward()
    optimizer.step()


@torch.no_grad()
def test():
    model.eval()
    out, accs = model(), []
    for _, mask in data('train_mask', 'val_mask', 'test_mask'):
        pred = out[mask].argmax(1)
        acc = pred.eq(data.y[mask]).sum().item() / mask.sum().item()
        accs.append(acc)
    return accs


best_val_acc = test_acc = 0
for epoch in range(1, 201):
    train()
    train_acc, val_acc, tmp_test_acc = test()
    if val_acc > best_val_acc:
        best_val_acc = val_acc
        test_acc = tmp_test_acc
    print(f'Epoch: {epoch:03d}, Train: {train_acc:.4f}, '
          f'Val: {best_val_acc:.4f}, Test: {test_acc:.4f}')