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remove the output file options from pileup_sites()
R-CMD-check-bioc #360: Pull request #108 opened by kriemo
September 1, 2023 21:49 44m 43s drop-output-files
September 1, 2023 21:49 44m 43s
rip out the output file options from pileup_sites()
R-CMD-check-bioc #359: Commit ac6f486 pushed by kriemo
September 1, 2023 21:49 40m 44s drop-output-files
September 1, 2023 21:49 40m 44s
refactor filterparam interface with c functions
R-CMD-check-bioc #358: Commit afa2567 pushed by kriemo
September 1, 2023 18:42 46m 27s drop-output-files
September 1, 2023 18:42 46m 27s
refactor filterparam interface with c functions
R-CMD-check-bioc #357: Commit afa2567 pushed by kriemo
September 1, 2023 18:40 35m 27s devel
September 1, 2023 18:40 35m 27s
modularize
R-CMD-check-bioc #356: Pull request #107 opened by kriemo
September 1, 2023 17:39 1h 14m 12s mod
mod
September 1, 2023 17:39 1h 14m 12s
refactor filterparam interface with c functions
R-CMD-check-bioc #355: Commit 769ec35 pushed by kriemo
September 1, 2023 17:38 39m 32s mod
mod
September 1, 2023 17:38 39m 32s
replace apply with vectorized approach and add tests
R-CMD-check-bioc #354: Commit 35e9ada pushed by kriemo
August 31, 2023 22:14 34m 37s devel
August 31, 2023 22:14 34m 37s
drop genomic-unstranded option (#106)
R-CMD-check-bioc #353: Commit f3fa628 pushed by kriemo
August 28, 2023 20:23 36m 59s devel
August 28, 2023 20:23 36m 59s
drop genomic-unstranded option
R-CMD-check-bioc #352: Pull request #106 opened by kriemo
August 28, 2023 17:56 1h 49m 47s unstranded
August 28, 2023 17:56 1h 49m 47s
drop genomic-unstranded option
R-CMD-check-bioc #351: Commit 5883d51 pushed by kriemo
August 28, 2023 16:58 44m 38s unstranded
August 28, 2023 16:58 44m 38s
standardize fasta arg (#105)
R-CMD-check-bioc #350: Commit 5442866 pushed by kriemo
August 23, 2023 15:24 32m 49s vignette
August 23, 2023 15:24 32m 49s
standardize fasta arg (#105)
R-CMD-check-bioc #349: Commit 5442866 pushed by kriemo
August 21, 2023 16:33 48m 42s devel
August 21, 2023 16:33 48m 42s
standardize fasta arg
R-CMD-check-bioc #348: Pull request #105 opened by kriemo
August 21, 2023 15:52 42m 11s fasta-arg
August 21, 2023 15:52 42m 11s
additional renaming
R-CMD-check-bioc #347: Commit 7b0a72f pushed by kriemo
August 21, 2023 14:15 48m 30s fasta-arg
August 21, 2023 14:15 48m 30s
standardize fasta naming, and expand fasta file path
R-CMD-check-bioc #346: Commit 98b06a3 pushed by kriemo
August 17, 2023 22:47 35m 20s fasta-arg
August 17, 2023 22:47 35m 20s
disable call to calc_scAEI, related to #104
R-CMD-check-bioc #345: Commit 05c128a pushed by kriemo
August 8, 2023 17:03 55m 21s devel
August 8, 2023 17:03 55m 21s
simplify doc to debug pkgdown [skip-ci]
R-CMD-check-bioc #344: Commit b11e52a pushed by kriemo
August 8, 2023 13:58 2m 1s devel
August 8, 2023 13:58 2m 1s
Update _pkgdown.yml
R-CMD-check-bioc #343: Commit b6d5cf6 pushed by jayhesselberth
August 8, 2023 00:37 38m 4s devel
August 8, 2023 00:37 38m 4s
single cell AEI functionality (#103)
R-CMD-check-bioc #342: Commit f34b426 pushed by kriemo
August 7, 2023 21:57 2h 15m 37s devel
August 7, 2023 21:57 2h 15m 37s
single cell AEI functionality
R-CMD-check-bioc #341: Pull request #103 opened by kriemo
August 7, 2023 21:10 42m 25s scaei-impl
August 7, 2023 21:10 42m 25s
add test and example
R-CMD-check-bioc #340: Commit 0d295dd pushed by kriemo
August 7, 2023 21:08 36m 15s scaei-impl
August 7, 2023 21:08 36m 15s
progress with handling unstranded data, needs further testing
R-CMD-check-bioc #339: Commit f5496f0 pushed by kriemo
August 4, 2023 22:10 52m 34s scaei-impl
August 4, 2023 22:10 52m 34s
Consensus base counting for pileup_cells (#102)
R-CMD-check-bioc #337: Commit 6132ed7 pushed by kriemo
July 26, 2023 20:52 42m 43s scaei-impl
July 26, 2023 20:52 42m 43s