From 6aa33d276083bf15598974570705ed97a8247307 Mon Sep 17 00:00:00 2001 From: "Huska, Matthew" Date: Wed, 3 Jan 2024 15:04:49 +0100 Subject: [PATCH 1/2] Run dryrun action on PR against main or dev, and pushes directly to main --- .github/workflows/dryrun.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/dryrun.yml b/.github/workflows/dryrun.yml index fffa6dc..e851422 100644 --- a/.github/workflows/dryrun.yml +++ b/.github/workflows/dryrun.yml @@ -2,11 +2,11 @@ name: dry run CI on: push: branches: - - dev + - main pull_request: - # Sequence of patterns matched against refs/heads branches: - main + - dev env: From 59d26568804ff8b551e07666035ffa8f01287c1b Mon Sep 17 00:00:00 2001 From: "Huska, Matthew" Date: Wed, 3 Jan 2024 16:43:43 +0100 Subject: [PATCH 2/2] Add python-version to matrix (fixed to 3.9 for now), and include nextflow version in job name --- .github/workflows/dryrun.yml | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/.github/workflows/dryrun.yml b/.github/workflows/dryrun.yml index e851422..681521f 100644 --- a/.github/workflows/dryrun.yml +++ b/.github/workflows/dryrun.yml @@ -14,7 +14,7 @@ env: jobs: test: - name: Dry run ${{ matrix.inputtype }}-${{ matrix.profile }} pipeline test + name: Dry run ${{ matrix.inputtype }}-${{ matrix.profile }}-nf_${{ matrix.NXF_VER }} pipeline test runs-on: ubuntu-latest strategy: matrix: @@ -26,6 +26,8 @@ jobs: - illumina - nanopore profile: ["docker", "conda"] # TODO "singularity"] + python-version: + - "3.9" steps: - name: Check out pipeline code uses: actions/checkout@v3