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IGCB_biological_images

This is the hub for the IGCB stats workshop on April 29, 2024: "Using Google Colab for Machine Learning with Biological Data"

Among the files, there are hands-on jupyter notebooks and a test dataset:

Image Acquisition Module:

  • A "completed" version where all code has been executed so that you can see the results: Open In Colab
  • A "ready to run" version that you can execute the code in for yourself, or copy and edit as you wish: Open In Colab

Training a Model Module:

  • A "completed" version where all code has been executed so that you can see the results: Open In Colab
  • A "ready to run" version that you can execute the code in for yourself, or copy and edit as you wish: Open In Colab

If you want to follow along, here is a data set you can download (and then upload to google drive): https://ndownloader.figshare.com/files/28871331?private_link=26890b409bb01c747551

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