From e999d555933eea646af2ad6350e6310f3845b849 Mon Sep 17 00:00:00 2001 From: rhysnewell Date: Thu, 11 Jan 2024 05:12:06 +0000 Subject: [PATCH] fix: update tests again --- test/test_recover.py | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/test/test_recover.py b/test/test_recover.py index 901c34da..d1775d0a 100644 --- a/test/test_recover.py +++ b/test/test_recover.py @@ -40,11 +40,11 @@ def test_recover_simple_inputs(self): self.assertTrue("metabat_ssens" in output) self.assertTrue("metabat_sspec" in output) self.assertTrue("metabat2" in output) - self.assertTrue("maxbin2" in output) + self.assertTrue("maxbin2" not in output) self.assertTrue("rosella" in output) self.assertTrue("semibin" in output) self.assertTrue("vamb" in output) - self.assertTrue("concoct" in output) + self.assertTrue("concoct" not in output) self.assertTrue("das_tool" in output) # Refinery @@ -308,7 +308,6 @@ def test_recover_binning_only(self): f"--output {tmpdir}/test " f"--conda-prefix {path_to_conda} " f"--dryrun --tmpdir {tmpdir} " - f"--extra-binners maxbin concoct " f"--snakemake-cmds \" --quiet\" " ) output = extern.run(cmd)