From d9f8f7d14a3fa8762d54a3d9ce673c7aa6af462c Mon Sep 17 00:00:00 2001
From: rhysnewell <rhys.newell94@gmail.com>
Date: Thu, 11 Jan 2024 23:55:36 +0000
Subject: [PATCH] fix: properly transfer data from tempfile

---
 aviary/scripts/singlem_reads.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/aviary/scripts/singlem_reads.py b/aviary/scripts/singlem_reads.py
index 2220bb06..a23913ef 100644
--- a/aviary/scripts/singlem_reads.py
+++ b/aviary/scripts/singlem_reads.py
@@ -177,8 +177,8 @@ def _check_processes(self, max_processes: int, logf):
         while len(self.process_queue) > max_processes:
             for i, (p, f) in enumerate(self.process_queue):
                 if p.poll() is not None:
-                    f.seek(0)
-                    logf.write(f.read())
+                    for line in f:
+                        logf.write(line)
                     f.close()
                     self.process_queue.pop(i)
                     break