diff --git a/changelog.d/20231012_145036_maria_fix_getting_cs_content_when_s3_contains_empty_dirs.md b/changelog.d/20231012_145036_maria_fix_getting_cs_content_when_s3_contains_empty_dirs.md
new file mode 100644
index 000000000000..7ac19bf69e4d
--- /dev/null
+++ b/changelog.d/20231012_145036_maria_fix_getting_cs_content_when_s3_contains_empty_dirs.md
@@ -0,0 +1,4 @@
+### Fixed
+
+- Getting CS content when S3 bucket contains manually created directories
+  (<https://github.com/opencv/cvat/pull/6997>)
diff --git a/cvat/apps/engine/cloud_provider.py b/cvat/apps/engine/cloud_provider.py
index 4083ff71394e..ab9474de17f9 100644
--- a/cvat/apps/engine/cloud_provider.py
+++ b/cvat/apps/engine/cloud_provider.py
@@ -467,7 +467,7 @@ def _list_raw_content_on_one_page(
             **({'Prefix': prefix} if prefix else {}),
             **({'ContinuationToken': next_token} if next_token else {}),
         )
-        files = [f['Key'] for f in response.get('Contents', [])]
+        files = [f['Key'] for f in response.get('Contents', []) if not f['Key'].endswith('/')]
         directories = [p['Prefix'] for p in response.get('CommonPrefixes', [])]
 
         return {