diff --git a/bin/summary_report.py b/bin/summary_report.py index 3294b46..c0884f4 100755 --- a/bin/summary_report.py +++ b/bin/summary_report.py @@ -498,6 +498,7 @@ def add_nextclade_results(self, nextclade_results): self.add_column_raw('nextclade_clade', res_data['clade']) + self.add_column_raw('nextclade_pango', res_data["Nextclade_pango"]) # Nextclade's pangolin assigment self.add_column_raw('nextclade_mutations_nt', res_data['substitutions']) self.add_column_raw('nextclade_mutations', res_data['aaSubstitutions']) self.add_column_raw('nextclade_deletions_nt', res_data['deletions'])