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setup.py
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setup.py
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from setuptools import setup
snaptools_version = '1.4.8'
setup(
name='snaptools',
version=snaptools_version,
author='Rongxin Fang',
author_email='[email protected]',
license='LICENSE',
packages=['snaptools'],
description='A module for working with snap files in Python',
url='https://github.com/r3fang/SnapTools.git',
python_requires='>=2.7',
install_requires=[
"pysam",
"h5py",
"numpy",
"pybedtools>=0.7",
"python-louvain",
"future"
],
keywords = ["Bioinformatics pipeline",
"Single cell analysis",
"Epigenomics",
"Epigenetics",
"ATAC-seq",
"Chromatin Accessibility",
"Functional genomics"],
scripts = ["bin/snaptools"],
zip_safe=False)
if __name__ == '__main__':
f = open("snaptools/__init__.py",'w')
f.write("__version__ = \'"+snaptools_version+"\'"+"\n")
f.close()