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db-pro.yaml
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on:
push:
branches:
- master
- main
pull_request:
branches:
- master
- main
name: DBs + Posit Pro Drivers (Linux)
jobs:
database:
runs-on: ubuntu-latest
services:
oracle:
image: gvenzl/oracle-xe:21.3.0
ports:
- 1521:1521
env:
ORACLE_RANDOM_PASSWORD: true
ORACLE_DATABASE: test
APP_USER: RodbcR
APP_USER_PASSWORD: Password12
options: >-
--health-cmd healthcheck.sh
--health-interval 10s
--health-timeout 5s
--health-retries 10
postgres:
image: postgres
ports:
- 5432:5432
env:
POSTGRES_USER: postgres
POSTGRES_PASSWORD: password
POSTGRES_DB: test
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
sqlserver:
image: mcr.microsoft.com/mssql/server:2017-latest-ubuntu
ports:
- 1433:1433
env:
ACCEPT_EULA: Y
SA_PASSWORD: Password12
env:
ODBC_DRIVERS_VINTAGE: "PRO"
CRAN: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"
ODBCSYSINI: ${{ github.workspace }}/.github/odbc
TNS_ADMIN: ${{ github.workspace }}/.github/odbc
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-r@v2
- name: Install Driver Manager
run: sudo apt-get install -y unixodbc-dev
- name: Install MySQL Driver
run: |
sudo systemctl start mysql.service
mysql -uroot -h127.0.0.1 -proot -e 'CREATE DATABASE `test`;'
echo "ODBC_CS_MYSQL=dsn=ProMySQL" >> $GITHUB_ENV
mkdir -p $ODBCSYSINI/pro_drivers/mysql
touch $ODBCSYSINI/pro_drivers/mysql.tar.gz
curl ${{ secrets.PRO_DRIVER_MYSQL }} --output $ODBCSYSINI/pro_drivers/mysql.tar.gz
tar -xvzf $ODBCSYSINI/pro_drivers/mysql.tar.gz -C $ODBCSYSINI/pro_drivers/mysql
- name: Install SQL Server Driver
run: |
echo "ODBC_CS_SQLSERVER=dsn=ProMicrosoftSQLServer;UID=SA;PWD=Password12" >> $GITHUB_ENV
mkdir -p $ODBCSYSINI/pro_drivers/sql_server
touch $ODBCSYSINI/pro_drivers/sql_server.tar.gz
curl ${{ secrets.PRO_DRIVER_SQL_SERVER }} --output $ODBCSYSINI/pro_drivers/sql_server.tar.gz
tar -xvzf $ODBCSYSINI/pro_drivers/sql_server.tar.gz -C $ODBCSYSINI/pro_drivers/sql_server
- name: Install Oracle Driver
run: |
echo "ODBC_CS_ORACLE=dsn=ProOracle;UID=RodbcR;PWD=Password12;DBQ=test" >> $GITHUB_ENV
.github/odbc/install-oracle-driver.sh
echo "LD_LIBRARY_PATH=/opt/oracle/instantclient_21_12:$LD_LIBRARY_PATH" >> $GITHUB_ENV
mkdir -p $ODBCSYSINI/pro_drivers/oracle
touch $ODBCSYSINI/pro_drivers/oracle.tar.gz
curl ${{ secrets.PRO_DRIVER_ORACLE }} --output $ODBCSYSINI/pro_drivers/oracle.tar.gz
tar -xvzf $ODBCSYSINI/pro_drivers/oracle.tar.gz -C $ODBCSYSINI/pro_drivers/oracle
- name: Install PostgreSQL Driver
run: |
echo "ODBC_CS_POSTGRES=dsn=ProPostgreSQL" >> $GITHUB_ENV
mkdir -p $ODBCSYSINI/pro_drivers/postgresql
touch $ODBCSYSINI/pro_drivers/postgresql.tar.gz
curl ${{ secrets.PRO_DRIVER_POSTGRESQL }} --output $ODBCSYSINI/pro_drivers/postgresql.tar.gz
tar -xvzf $ODBCSYSINI/pro_drivers/postgresql.tar.gz -C $ODBCSYSINI/pro_drivers/postgresql
- name: Install Snowflake Driver
run: |
echo "ODBC_CS_SNOWFLAKE=dsn=Snowflake" >> $GITHUB_ENV
mkdir -p $ODBCSYSINI/pro_drivers/snowflake
touch $ODBCSYSINI/pro_drivers/snowflake.tar.gz
curl ${{ secrets.PRO_DRIVER_SNOWFLAKE }} --output $ODBCSYSINI/pro_drivers/snowflake.tar.gz
tar -xvzf $ODBCSYSINI/pro_drivers/snowflake.tar.gz -C $ODBCSYSINI/pro_drivers/snowflake
echo "Driver=$ODBCSYSINI/pro_drivers/snowflake/bin/lib/libsnowflakeodbc_sb64.so" | tee -a $ODBCSYSINI/odbc.ini
# note that this assumes Snowflake is the last odbc.ini entry
- name: Prepare Snowflake private key
run: |
echo "${{ secrets.SNOWFLAKE_PRIVATE_KEY }}" > $ODBCSYSINI/private_key.pem
echo "PRIV_KEY_FILE=$ODBCSYSINI/private_key.pem" | tee -a $ODBCSYSINI/odbc.ini
export SNOWFLAKE_PRIVATE_KEY_EXISTS=TRUE
- name: Install dependencies
uses: r-lib/actions/setup-r-dependencies@v2
with:
needs: check
- name: Install locally to avoid error with test_local()
run: |
R CMD INSTALL .
env:
LIB_DIR: /usr/lib/x86_64-linux-gnu/
INCLUDE_DIR: /usr/include
- name: Test
run: |
options("odbc.interruptible"=TRUE);testthat::test_local(reporter = testthat::ProgressReporter$new(max_failures = Inf, update_interval = Inf))
shell: Rscript {0}