Fix doctests failures in scheduled tests #3784
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agriyakhetarpal
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martinjrobins,
Saransh-cpp,
kratman and
arjxn-py
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This should be ready to cherry-pick into #3780's branch and will resolve the Ubuntu doctests. I shall look into the M-series builds in a separate PR |
kratman
approved these changes
Jan 30, 2024
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## develop #3784 +/- ##
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Coverage 99.59% 99.59%
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Files 257 257
Lines 20802 20802
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Hits 20718 20718
Misses 84 84 ☔ View full report in Codecov by Sentry. |
Saransh-cpp
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rtimms
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May 16, 2024
* Bump to v23.9rc0 * Merge pull request #3412 from agriyakhetarpal/drop-i686-manylinux2014-support Drop support for i686 manylinux * Merge pull request #3413 from Saransh-cpp/improve-release-workflow Improve release workflow, add a note, bump version manually * Merge pull request #3436 from Saransh-cpp/fortnightly-wheels Build wheels on the 1st and 15th of every month * Merge pull request #3445 from pybamm-team/issue-3428-rename-exchange #3428 exchange-current density error * Merge pull request #3449 from pybamm-team/i3431-windows-wheels Fix failing windows wheel builds * Merge pull request #3456 from abillscmu/issue-3224-initial_soc make initial soc work with half cell models * Merge pull request #3467 from abillscmu/bugfix/initial_soh * Merge pull request #3423 from jsbrittain/jax_gpu JaxSolver fails when using GPU support with no input parameters * Fix changelog * Merge pull request #3475 from arjxn-py/fix-default-imports Resolve default imports for optional dependencies * Bump - `v23.9rc1` * Fix date in CHANGELOG * Bump version to v23.9 * Fix docs about Jax solver compatibility with Python versions (#3702) * Ensure correct Python versions for Jax solver compatibility * Simplify array of Python versions Co-authored-by: Eric G. Kratz <[email protected]> * Use different conjunction Co-authored-by: Eric G. Kratz <[email protected]> --------- Co-authored-by: Eric G. Kratz <[email protected]> * Merge pull request #3706 from agriyakhetarpal/fix-pybamm-install-odes Make `pybamm_install_odes` a bit more robust * #3690 fix issue with skipped steps (#3708) * #3690 fix issue with skipped steps * #3690 changelog * #3690 add test * #3611 use actual cell volume for average total heating (#3707) * #3611 use actual cell volume for average total heating * #3611 changelog * #3611 account for number of electrode pairs * #3611 update variable names * Improve the release workflow (#3737) * Try fixing the release workflow * Turn off safety * Fix CHANGELOG * Add OS * Use regex for better matches * Update instructions, add safety checks * checkout to the version branch for the final release * Bump to v24.1rc1 * #3630 fix interpolant shape error (#3761) * #3630 fix interpolant shape error * #3630 changelog * Bump to v24.1rc2 * Bump to v24.1 * Fix doctests failures in scheduled tests (#3784) Closes #3781 * Resolve broken `scikits.odes` installation on self-hosted M-series runner (#3785) * Try fixing M-series runner tests This is being done by adding SuiteSparse and SUNDIALS installations which might have been missing on the runner, which broke `scikits.odes`. * Don't use Homebrew SUNDIALS, use LD_LIBRARY_PATH * Don't use Homebrew to install SUNDIALS * Force remove pip cache for `scikits.odes` --------- Co-authored-by: Eric G. Kratz <[email protected]> * add temperature dependence to MSMR model * changelog * fix tests * fix example * rob comments * update notebook --------- Co-authored-by: Ferran Brosa Planella <[email protected]> Co-authored-by: Saransh Chopra <[email protected]> Co-authored-by: Martin Robinson <[email protected]> Co-authored-by: Agriya Khetarpal <[email protected]> Co-authored-by: Eric G. Kratz <[email protected]> Co-authored-by: Robert Timms <[email protected]> Co-authored-by: Saransh-cpp <[email protected]>
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js1tr3
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Aug 12, 2024
* Bump to v23.9rc0 * Merge pull request pybamm-team#3412 from agriyakhetarpal/drop-i686-manylinux2014-support Drop support for i686 manylinux * Merge pull request pybamm-team#3413 from Saransh-cpp/improve-release-workflow Improve release workflow, add a note, bump version manually * Merge pull request pybamm-team#3436 from Saransh-cpp/fortnightly-wheels Build wheels on the 1st and 15th of every month * Merge pull request pybamm-team#3445 from pybamm-team/issue-3428-rename-exchange pybamm-team#3428 exchange-current density error * Merge pull request pybamm-team#3449 from pybamm-team/i3431-windows-wheels Fix failing windows wheel builds * Merge pull request pybamm-team#3456 from abillscmu/issue-3224-initial_soc make initial soc work with half cell models * Merge pull request pybamm-team#3467 from abillscmu/bugfix/initial_soh * Merge pull request pybamm-team#3423 from jsbrittain/jax_gpu JaxSolver fails when using GPU support with no input parameters * Fix changelog * Merge pull request pybamm-team#3475 from arjxn-py/fix-default-imports Resolve default imports for optional dependencies * Bump - `v23.9rc1` * Fix date in CHANGELOG * Bump version to v23.9 * Fix docs about Jax solver compatibility with Python versions (pybamm-team#3702) * Ensure correct Python versions for Jax solver compatibility * Simplify array of Python versions Co-authored-by: Eric G. Kratz <[email protected]> * Use different conjunction Co-authored-by: Eric G. Kratz <[email protected]> --------- Co-authored-by: Eric G. Kratz <[email protected]> * Merge pull request pybamm-team#3706 from agriyakhetarpal/fix-pybamm-install-odes Make `pybamm_install_odes` a bit more robust * pybamm-team#3690 fix issue with skipped steps (pybamm-team#3708) * pybamm-team#3690 fix issue with skipped steps * pybamm-team#3690 changelog * pybamm-team#3690 add test * pybamm-team#3611 use actual cell volume for average total heating (pybamm-team#3707) * pybamm-team#3611 use actual cell volume for average total heating * pybamm-team#3611 changelog * pybamm-team#3611 account for number of electrode pairs * pybamm-team#3611 update variable names * Improve the release workflow (pybamm-team#3737) * Try fixing the release workflow * Turn off safety * Fix CHANGELOG * Add OS * Use regex for better matches * Update instructions, add safety checks * checkout to the version branch for the final release * Bump to v24.1rc1 * pybamm-team#3630 fix interpolant shape error (pybamm-team#3761) * pybamm-team#3630 fix interpolant shape error * pybamm-team#3630 changelog * Bump to v24.1rc2 * Bump to v24.1 * Fix doctests failures in scheduled tests (pybamm-team#3784) Closes pybamm-team#3781 * Resolve broken `scikits.odes` installation on self-hosted M-series runner (pybamm-team#3785) * Try fixing M-series runner tests This is being done by adding SuiteSparse and SUNDIALS installations which might have been missing on the runner, which broke `scikits.odes`. * Don't use Homebrew SUNDIALS, use LD_LIBRARY_PATH * Don't use Homebrew to install SUNDIALS * Force remove pip cache for `scikits.odes` --------- Co-authored-by: Eric G. Kratz <[email protected]> * add temperature dependence to MSMR model * changelog * fix tests * fix example * rob comments * update notebook --------- Co-authored-by: Ferran Brosa Planella <[email protected]> Co-authored-by: Saransh Chopra <[email protected]> Co-authored-by: Martin Robinson <[email protected]> Co-authored-by: Agriya Khetarpal <[email protected]> Co-authored-by: Eric G. Kratz <[email protected]> Co-authored-by: Robert Timms <[email protected]> Co-authored-by: Saransh-cpp <[email protected]>
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Description
Closes #3781
Type of change
Key checklist:
$ pre-commit run(or$ nox -s pre-commit) (see CONTRIBUTING.md for how to set this up to run automatically when committing locally, in just two lines of code)$ python run-tests.py --all(or$ nox -s tests)$ python run-tests.py --doctest(or$ nox -s doctests)You can run integration tests, unit tests, and doctests together at once, using
$ python run-tests.py --quick(or$ nox -s quick).Further checks: