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Proposal for multiple scan representation of USIs #2

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ypriverol opened this issue Apr 18, 2024 · 0 comments
Open

Proposal for multiple scan representation of USIs #2

ypriverol opened this issue Apr 18, 2024 · 0 comments
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enhancement New feature or request help wanted Extra attention is needed question Further information is requested

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@ypriverol
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@edeutsch poposed the following representation for representing multiple scans within the same MSruns:

So we already can show a USI for a single spectrum that is a DIA spectrum like this:

mzspec:PXD019909:20180914_QE8_nLC0_BDA_SA_DIA_Skin_Dendritic_cells_DC_MT_600000:scan:62396:SAGQGEVLVYVEDPAGHQEEAK/3

But what if we twisted the USI a little bit from “scan:62396” to something like “scanseries:62296;62346;62396;62446;62496”? (a faked example assuming that the elution peak is sampled over 5 peaks and the scan cycle is 50 scans) so the full USI would be:

mzspec:PXD019909:20180914_QE8_nLC0_BDA_SA_DIA_Skin_Dendritic_cells_DC_MT_600000:scan:62396:SAGQGEVLVYVEDPAGHQEEAK/3
mzspec:PXD019909:20180914_QE8_nLC0_BDA_SA_DIA_Skin_Dendritic_cells_DC_MT_600000:scan:62346:SAGQGEVLVYVEDPAGHQEEAK/3

-> scanseries:62296;62346;62396;62446;62496

mzspec:PXD019909:20180914_QE8_nLC0_BDA_SA_DIA_Skin_Dendritic_cells_DC_MT_600000:scanseries:62296;62346;62396;62446;62496:SAGQGEVLVYVEDPAGHQEEAK/3

@ypriverol ypriverol added enhancement New feature or request help wanted Extra attention is needed question Further information is requested labels Apr 18, 2024
@ypriverol ypriverol self-assigned this Apr 18, 2024
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