Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

generate-report Syntax-Warning #14

Open
milanamilan opened this issue Jul 6, 2023 · 0 comments
Open

generate-report Syntax-Warning #14

milanamilan opened this issue Jul 6, 2023 · 0 comments

Comments

@milanamilan
Copy link

Hi. Thank you for creating this tool. I have been able to execute and utilize all the other tools successfully, except for generate-report for which I receive the error below. Is this a true syntax warning or is there something wrong with my annotation summary file?

/opt/conda/opt/crispritz/Python_Scripts/Plot/radar_chart.py:74: SyntaxWarning: "is" with a literal. Did you mean "=="?
if '-pop' is sys.argv[:]:
Traceback (most recent call last):
File "/opt/conda/opt/crispritz/Python_Scripts/Plot/radar_chart.py", line 51, in
inAnnotation_ref = open(annotation_ref, 'r').readlines()
FileNotFoundError: [Errno 2] No such file or directory: 'no'

Sorry if this is just a me issue. I am very new to coding and CRISPR tools. Thank you.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant