From cb58212379803788c04ca5793baaa760cbbeaa81 Mon Sep 17 00:00:00 2001
From: Cole Lyman <Cole@colelyman.com>
Date: Fri, 8 Jul 2022 21:09:49 -0600
Subject: [PATCH] Fix bug when comparing two samples with the same name. (#228)

---
 CRISPResso2/CRISPRessoCompareCORE.py | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/CRISPResso2/CRISPRessoCompareCORE.py b/CRISPResso2/CRISPRessoCompareCORE.py
index cf2e287f..e10649f1 100644
--- a/CRISPResso2/CRISPRessoCompareCORE.py
+++ b/CRISPResso2/CRISPRessoCompareCORE.py
@@ -118,6 +118,9 @@ def main():
             if 'running_info' in run_info_2 and 'name' in run_info_2['running_info'] and run_info_2['running_info']['name']:
                 sample_2_name = run_info_2['running_info']['name']
 
+        if sample_1_name == sample_2_name:
+            sample_2_name += '_2'
+
         get_name_from_folder=lambda x: os.path.basename(os.path.abspath(x)).replace('CRISPResso_on_', '')
 
         if not args.name: