Misspelt command. (Allowable commands are in <release>/appassembler/bin directory).
$ ami-serach
-bash: ami-serach: command not found
(This was old-style syntax. Now we require options with - or -- syntax), By default we get the help.
$ ami-search-new ocimum
Unmatched argument: ocimum
Usage: <main class> [OPTIONS]
Description
===========
Options
=======
--basename=<userBasename>
User's basename for outputfiles (e.g. foo/bar/<basename>.
png. By default this is computed by AMI. This allows
users to create their own variants, but they won't be
known by default to subsequentapplications
--dictionary=<dictionaryList>...
symbolic names of dictionaries (likely to be obsoleted).
Good values are (country, disease, funders)
--dictionarySuffix=<dictionarySuffix>
suffix for search dictionary
Default: xml
--dictionaryTop=<dictionaryTopList>
local dictionary home directory
--dryrun=<dryrun> for testing runs a single phase without output, deletion
or transformation.(NYI).
--excludebase=<excludeBase>...
exclude child files of cTree (only works with --ctree).
Currently must be explicit or with trailing percent
for truncated glob.
--excludetree=<excludeTrees>...
exclude the CTrees in the list. (only works with
--cproject). Currently must be explicit but we'll add
globbing later.
--forcemake force 'make' regardless of file existence and dates.
--ignorePlugins=<ignorePluginList>...
list of plugins to skip (mainly for debugging)
Default: []
--includebase=<includeBase>...
include child files of cTree (only works with --ctree).
Currently must be explicit or with trailing percent
for truncated glob.
--includetree=<includeTrees>...
include only the CTrees in the list. (only works with
--cproject). Currently must be explicit but we'll add
globbing later.
--log4j=<log4j> <log4j>
format: <classname> <level>; sets logging level of
class, e.g.
org.contentmine.ami.lookups.WikipediaDictionary INFO
--logfile=<logfile> log file for each tree/file/image analyzed.
--rawfiletypes=<rawFileFormats>[,<rawFileFormats>...]...
suffixes of included files (html, pdf, xml): can be
concatenated with commas
-h, --help Show this help message and exit.
-p, --cproject=CProject CProject (directory) to process. This can be (a) a child
directory of cwd (current working directory (b) cwd
itself (use -p .) or (c) an absolute filename. No
defaults. The cProject name is the basename of the
file.
-t, --ctree[=CTree] CTree (directory) to process. This can be (a) a child
directory of cwd (current working directory, usually
cProject) (b) cwd itself, usually cTree (use -t .) or
(c) an absolute filename. No defaults. The cTree name
is the basename of the file.
-v, --verbose Specify multiple -v options to increase verbosity.
For example, `-v -v -v` or `-vvv`We map ERROR or WARN ->
0 (i.e. always print), INFO -> 1(-v), DEBUG->2 (-vv)
Default: []
-V, --version Print version information and exit.
Generic values (AMISearchTool)
================================
basename null
cproject
ctree
cTreeList null
dryrun false
excludeBase null
excludeTrees null
file types []
forceMake false
includeBase null
includeTrees null
log4j
logfile null
verbose 0
Specific values (AMISearchTool)
================================
dictionaryList null
dictionaryTop null
dictionarySuffix [xml]
ignorePlugins []
>ERROR: requires cProject
Command references non-existsnt project. This is often misspelt or not a child directory of current directory. (Note error message stack trace may by tidied and change).
$ ami-search-new -p osimum
Generic values (AMISearchTool)
================================
************************
WARNING: CProject directory does not exist
************************
basename null
cproject
ctree
cTreeList null
dryrun false
excludeBase null
excludeTrees null
file types []
forceMake false
includeBase null
includeTrees null
log4j
logfile null
verbose 0
Specific values (AMISearchTool)
================================
dictionaryList null
dictionaryTop null
dictionarySuffix [xml]
ignorePlugins []
>ERROR: requires cProject
###Misspelt argument
AMI (picocli) offers possible corrections:
$ ami-search-new -p ocimum200 --diktionary country
Unknown options: --diktionary, country
Possible solutions: --dictionary, --dictionarySuffix, --dictionaryTop
Generic values (AMISearchTool)
================================
cProject must be existing directory or have directory parent: ocimum200(/Users/pm286/workspace/tigr2ess/ocimum200
************************
WARNING: CProject directory does not exist
************************
basename null
cproject
ctree
cTreeList null
dryrun false
excludeBase null
excludeTrees null
file types []
forceMake false
includeBase null
includeTrees null
log4j
logfile null
verbose 0
Specific values (AMISearchTool)
================================
dictionaryList null
dictionaryTop null
dictionarySuffix [xml]
ignorePlugins []
>ERROR: requires cProject
### missing minus
Command misses a - from --dictionary (easy to do). The system offers
alternatives.
$ ami-search-new -p ocimum200 -dictionary country
Unknown options: -dictionary, country
Possible solutions: --dictionary, --dictionarySuffix, --dictionaryTop
Command misses a - from --doictionary (easy to do). The system offers
alternatives.
$ ami-search-new -p ocimum200 -dictionary country
Unknown options: -dictionary, country
Possible solutions: --dictionary, --dictionarySuffix, --dictionaryTop