From f48e220606d926e3e0b40f9afaa295ca30025738 Mon Sep 17 00:00:00 2001
From: pb-jchin <jchin@pacificbiosciences.com>
Date: Mon, 7 Sep 2015 15:07:35 -0700
Subject: [PATCH] get 0.4 release tag. see each individual module for what
 improvments are done

summary:

The graph to layout code add a new rule to reduce mis-assembly, see https://github.com/PacificBiosciences/FALCON/pull/179
Initial raw read alignment hit are sorted by overlap length to get error correction reads more efficiently.  See https://github.com/PacificBiosciences/DALIGNER/pull/, https://github.com/PacificBiosciences/DALIGNER/pull/6
---
 DALIGNER | 2 +-
 DAZZ_DB  | 2 +-
 FALCON   | 2 +-
 3 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/DALIGNER b/DALIGNER
index dc506e6..1ee01a1 160000
--- a/DALIGNER
+++ b/DALIGNER
@@ -1 +1 @@
-Subproject commit dc506e67938c1c923ebb7e43ff8ce32ec923d8ba
+Subproject commit 1ee01a199d4b04ba7b4c5d1dd8c5f869c5a86dce
diff --git a/DAZZ_DB b/DAZZ_DB
index 337a0ee..88e3059 160000
--- a/DAZZ_DB
+++ b/DAZZ_DB
@@ -1 +1 @@
-Subproject commit 337a0ee0e77624094221577bdaa38c79b5444d91
+Subproject commit 88e30590eae130ee899c52e69f72a887c3a10026
diff --git a/FALCON b/FALCON
index d3939f2..49f0885 160000
--- a/FALCON
+++ b/FALCON
@@ -1 +1 @@
-Subproject commit d3939f2a4a5daaaa6090e1b386668c9c91d94f8e
+Subproject commit 49f0885cfcaf4aef10aa84a39dd7809aa8eb7068