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DESCRIPTION
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Package: fitode
Type: Package
Title: Tools for Ordinary Differential Equations Model Fitting
Version: 0.1.1.9000
Authors@R: c(
person("Sang Woo", "Park", role=c("aut","cre"),
email="[email protected]",
comment=c(ORCID="0000-0003-2202-3361")),
person("Ben","Bolker", role="aut",
comment=c(ORCID="0000-0002-2127-0443"))
)
Description: Methods and functions for fitting ordinary differential equations (ODE) model in 'R'. Sensitivity equations are used to compute the gradients of ODE trajectories with respect to underlying parameters, which in turn allows for more stable fitting. Other fitting methods, such as MCMC (Markov chain Monte Carlo), are also available.
License: GPL (>=2)
URL: https://github.com/parksw3/fitode
BugReports: https://github.com/parksw3/fitode/issues
Depends:
R (>= 4.0),
bbmle
Imports:
deSolve,
Deriv,
MASS,
numDeriv,
mvtnorm,
coda,
methods
Suggests:
knitr,
ggplot2,
nleqslv,
propagate,
testthat (>= 3.0.0)
VignetteBuilder: knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Config/testthat/edition: 3