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    5 repositories

    • skgGenomeTracks

      Public
      python module to plot beautiful and highly customizable genome browser tracks
      Python
      •
      GNU General Public License v3.0
      •114•2•2•0•Updated Jan 20, 2020Jan 20, 2020

    • gene2bed

      Public
      Jupyter Notebook
      •1•0•0•0•Updated May 7, 2019May 7, 2019

    • dna_methylation

      Public
      DNA methylation analysis toolkits
      Jupyter Notebook
      •1•0•3•0•Updated Apr 3, 2019Apr 3, 2019

    • intron_regions

      Public
      extract intron regions from gtf
      Jupyter Notebook
      •0•0•0•0•Updated Mar 12, 2019Mar 12, 2019

    • methyl_diff

      Public
      Computes probability of two samples being differentially methylated at given genomic position. Uses number of converted and non converted reads.
      C
      •1•0•0•0•Updated Apr 24, 2014Apr 24, 2014