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@sbgn The Systems Biology Graphical Notation

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    22 repositories

    • process-descriptions

      Public
      SBGN PD specification
      TeX
      •4•2•26•0•Updated Dec 2, 2024Dec 2, 2024

    • libsbgn

      Public
      Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++
      mavenjavaantsbgn
      HTML
      •
      Other
      •8•15•20•0•Updated Oct 8, 2024Oct 8, 2024

    • libsbgn.js

      Public
      Parsing and writing SBGN-ML files in javascript
      bioinformaticsxmlsystems-biologysbgnsbgnml
      JavaScript
      •
      MIT License
      •2•3•4•0•Updated Jul 8, 2024Jul 8, 2024

    • sbgn.github.io

      Public
      TeX
      •
      Creative Commons Zero v1.0 Universal
      •6k•1•3•0•Updated Jun 30, 2024Jun 30, 2024

    • entity-relationships

      Public
      SBGN ER specification
      PostScript
      •0•0•3•0•Updated Nov 7, 2023Nov 7, 2023

    • sbgn

      Public archive
      SBGN User Website and Developer Wiki (outdated version of the website)
      SCSS
      •
      MIT License
      •8•12•6•0•Updated Jan 20, 2023Jan 20, 2023

    • openchallenge

      Public
      4•5•0•0•Updated Nov 23, 2021Nov 23, 2021

    • ySBGN

      Public
      Translation between GraphML (yED) and SBGN-ML
      Java
      •
      GNU General Public License v2.0
      •1•5•19•1•Updated Apr 19, 2021Apr 19, 2021

    • sbgnbricks

      Public
      0•0•1•0•Updated Apr 12, 2021Apr 12, 2021

    • cd2sbgnml

      Public
      Translation between CellDesigner-flavoured SBML and SBGN-ML
      bioinformaticssystems-biologysbmlsbgnbiological-networkssbgn-ml
      Java
      •
      GNU Lesser General Public License v3.0
      •6•6•8•0•Updated Feb 26, 2021Feb 26, 2021

    • sbgnml_latex_spec

      Public
      LaTeX files for the SBGNML specification; initial import JIB 2020 document
      TeX
      •0•1•0•0•Updated Oct 7, 2020Oct 7, 2020

    • cd2sbgnml-webservice

      Public
      An easily deployable small webservice to translate CellDesigner-SBGN-ML files with cd2sbgnml
      Java
      •
      GNU Lesser General Public License v3.0
      •3•0•0•0•Updated Nov 25, 2019Nov 25, 2019

    • sbgnwebsiteredirectbackup

      Public
      The SBGN website
      HTML
      •0•0•0•0•Updated Feb 17, 2019Feb 17, 2019

    • glyph-files

      Public
      Files associated with SBGN glyphs
      0•0•0•0•Updated Mar 23, 2018Mar 23, 2018

    • educational-resources

      Public
      SBGN Education Resources
      1•3•0•0•Updated Feb 18, 2018Feb 18, 2018

    • logos

      Public
      SBGN Logos
      0•0•0•0•Updated Feb 14, 2018Feb 14, 2018

    • wiki-dev

      Public
      A forkable repo for the SBGN wiki
      0•0•0•0•Updated Apr 13, 2017Apr 13, 2017

    • wiki-files

      Public
      Files associated with the SBGN wiki (PUT CONTENT IN A BETTER REPO WHEN POSSIBLE)
      0•0•0•0•Updated Sep 30, 2016Sep 30, 2016

    • old-sbgn-wiki-archive

      Public
      Contains exported files from a previous SBGN website
      HTML
      •0•0•0•0•Updated Sep 30, 2016Sep 30, 2016

    • competition

      Public
      Competition page files
      0•0•0•0•Updated Jun 11, 2016Jun 11, 2016

    • activity-flow

      Public
      SBGN AF specification
      PostScript
      •0•0•1•0•Updated Jun 10, 2016Jun 10, 2016

    • pathway-archive

      Public
      Archive of Manuscript Pathways Converted to SBGN
      0•2•0•0•Updated Jun 10, 2016Jun 10, 2016