Open Problems in Single-Cell Analysis
30 packages
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grn_methods/scgluePublished
Aug 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference26 -
methods/lmds_irlba_rfPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality25 -
control_methods/mean_per_genePublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality25 -
metrics/mean_rowwise_errorPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction24 -
process_dataset/bootstrapPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction24 -
control_methods/random_predictPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality24 -
process_dataset/run_limmaPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction23 -
control_methods/zerosPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality23 -
metrics/mean_rowwise_correlationPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction22 -
grn_methods/tigressPublished
Aug 29, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference21 -
process_dataset/filter_obsPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction21 -
methods/lmPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality21 -
grn_methods/scsglPublished
Aug 29, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference21 -
methods_transcript_assignment/basic_transcript_assignmentPublished
Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing20 -
methods_segmentation/custom_segmentationPublished
Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing20 -
control_methods/pearson_corrPublished
Sep 18, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference20 -
methods_calculate_cell_volume/alpha_shapesPublished
Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing19 -
control_methods/pearson_causalPublished
Sep 18, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference18 -
process_dataset/split_scPublished
Oct 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction18 -
process_dataset/add_uns_metadataPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction18 -
data_processors/process_datasetPublished
Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing18 -
methods_qc_filter/basic_qc_filterPublished
Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing18 -
grn_methods/scenicplusPublished
Aug 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference18 -
process_dataset/compute_pseudobulkPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction17 -
process_dataset/filter_varsPublished
Jun 4, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_perturbation_prediction17 -
control_methods/solutionPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality17 -
methods_count_aggregation/basic_count_aggregationPublished
Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing17 -
grn_methods/portiaPublished
Aug 28, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference17 -
methods/geneformerPublished
Nov 8, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration16 -
grn_methods/scgptPublished
Sep 9, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference16