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    42 repositories

    • Babel

      Public
      Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
      ncats-translator
      Python
      •
      MIT License
      •2•9•188•15•Updated Dec 14, 2024Dec 14, 2024

    • NameResolution

      Public
      A service for finding CURIEs from lexical strings.
      ncats-translatorshared-utility
      Python
      •
      MIT License
      •2•3•39•1•Updated Dec 14, 2024Dec 14, 2024

    • answer-appraiser

      Public
      Python
      •
      MIT License
      •4•0•0•0•Updated Nov 26, 2024Nov 26, 2024

    • reasoner-pydantic

      Public
      Pydantic models for the Reasoner API data formats
      ncats-translator
      Python
      •
      MIT License
      •0•4•13•2•Updated Nov 25, 2024Nov 25, 2024

    • Plater

      Public
      Plater automatically creates a TRAPI interface for a biolink-compliant neo4j graph.
      ncats-translatortrapishared-utility
      Python
      •7•1•5•1•Updated Nov 21, 2024Nov 21, 2024

    • CQS

      Public
      Rust
      •
      MIT License
      •3•0•3•0•Updated Nov 15, 2024Nov 15, 2024

    • TestHarness

      Public
      Python
      •
      MIT License
      •1•0•1•0•Updated Nov 15, 2024Nov 15, 2024

    • IssueRouter

      Public
      Route issues from Translator UI to Translator Services
      Python
      •
      MIT License
      •1•1•3•1•Updated Nov 15, 2024Nov 15, 2024

    • IssueScreenshots

      Public
      Screenshot images for created GitHub issues
      0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • NodeNormalization

      Public
      Service that produces Translator compliant nodes given a curie
      ncats-translatortrapishared-utility
      Python
      •
      MIT License
      •6•10•93•5•Updated Nov 8, 2024Nov 8, 2024

    • babel-validation

      Public
      Programs for validating compendia generated by Babel
      Scala
      •
      MIT License
      •0•0•10•4•Updated Nov 8, 2024Nov 8, 2024

    • callback-test-app

      Public
      Rust
      •0•0•1•0•Updated Aug 22, 2024Aug 22, 2024

    • Benchmarks

      Public
      Jupyter Notebook
      •
      MIT License
      •6•2•11•3•Updated Jul 23, 2024Jul 23, 2024

    • ontology-kp

      Public archive
      Translator Knowledge Provider for ontology triples
      ncats-translator
      Scala
      •
      MIT License
      •2•1•5•27•Updated Jul 4, 2024Jul 4, 2024

    • trapi-openapi-aggregator

      Public
      Open api proxy server to aggregate specs of similar infores and trapi versions into single openapi spec for smartapi registration.
      Python
      •0•1•0•0•Updated Jun 26, 2024Jun 26, 2024

    • graph-validation-test-runners

      Public
      This repository provides the implementation of some Translator knowledge graph validation Test Runners within the new 2023 Testing Infrastructure.
      Python
      •
      MIT License
      •0•0•1•0•Updated Jun 24, 2024Jun 24, 2024

    • RENCI-Python-image

      Public
      This specifies a base docker image for RENCI/Python deployments.
      Dockerfile
      •
      MIT License
      •1•0•0•0•Updated Jun 24, 2024Jun 24, 2024

    • PerformanceTestRunner

      Public
      Run performance tests against the Translator system
      Python
      •
      MIT License
      •0•0•5•1•Updated May 28, 2024May 28, 2024

    • TranslatorTestingModel

      Public
      Python
      •
      MIT License
      •0•0•7•2•Updated May 2, 2024May 2, 2024

    • bl_lookup

      Public
      Biolink Model Lookup Service
      ncats-translatorshared-utility
      Python
      •
      MIT License
      •0•0•7•2•Updated Feb 5, 2024Feb 5, 2024

    • RedisTPF

      Public
      Experimental Implementation of Redis based TRAPI Pattern Fragments
      Python
      •0•0•0•0•Updated Dec 20, 2023Dec 20, 2023

    • bmt-lite

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 14, 2023Dec 14, 2023

    • SRI_testing

      Public
      Python
      •
      MIT License
      •1•0•36•1•Updated Dec 4, 2023Dec 4, 2023

    • UI_Test_Runner

      Public
      Python
      •0•0•0•0•Updated Oct 13, 2023Oct 13, 2023

    • Jaeger-demo

      Public
      This repo is some examples on instrumenting python code to perform distributed tracing.
      Python
      •
      MIT License
      •1•0•1•0•Updated Sep 19, 2023Sep 19, 2023

    • StressTester

      Public archive
      Stress Test Harness of Translator Services
      Python
      •0•0•0•0•Updated Sep 1, 2023Sep 1, 2023

    • NoveltyScore

      Public
      Initial novelty score implementation
      Python
      •
      MIT License
      •1•0•2•0•Updated Aug 10, 2023Aug 10, 2023

    • QueryLogger

      Public archive
      JavaScript
      •0•0•0•0•Updated Jun 5, 2023Jun 5, 2023

    • binder

      Public
      Python
      •
      MIT License
      •0•0•2•4•Updated Feb 14, 2023Feb 14, 2023

    • EdgeNormalization

      Public
      A service for producing relationships compliant with the biolink model
      ncats-translatorshared-utility
      Python
      •
      MIT License
      •1•0•15•1•Updated Aug 6, 2022Aug 6, 2022