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    17 repositories

    • Piscivorous_Baltic_Herring

      Public
      Files related to "Sympatric genetic differentiation in the extremely abundant, broadcast-spawning Atlantic herring"
      R
      •
      MIT License
      •0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

    • Equine_late_greying

      Public
      Data and code relating to "An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses"
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 8, 2024Aug 8, 2024

    • Herring_inversions_short_reads

      Public
      Evolutionary genomics of chromosomal inversions in Atlantic herring
      R
      •2•0•0•0•Updated Jul 22, 2024Jul 22, 2024

    • 2023_Horse_mackerel_popgen

      Public
      R
      •
      MIT License
      •1•1•0•0•Updated Jun 16, 2024Jun 16, 2024

    • Sprat_pool_reseq

      Public
      Code & files realted to "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"
      R
      •
      MIT License
      •0•0•0•0•Updated May 16, 2024May 16, 2024

    • Atlherr_inversion_evolution

      Public
      R
      •0•0•0•0•Updated Apr 23, 2024Apr 23, 2024

    • Herring_Inversions

      Public
      Files and code for inversion paper
      R
      •1•0•0•0•Updated Sep 25, 2023Sep 25, 2023

    • Epaulette_shark_mutation_rate

      Public
      De novo mutation rate estimation pipeline presented in manuscript: "Pedigree-based estimate of de novo mutation rate in the epaulette shark defines the lowest known vertebrate mutation rate"
      Shell
      •0•0•0•0•Updated Aug 23, 2023Aug 23, 2023

    • Ruff_assembly_2022

      Public
      0•0•0•0•Updated Jul 12, 2023Jul 12, 2023

    • Arctic_Herring_Introgression

      Public
      Code and supplementary figures for the manuscript: "A long-standing hybrid population between Pacific and Atlantic herring in a subarctic fjord of Norway"
      R
      •
      MIT License
      •0•0•0•0•Updated Jan 11, 2023Jan 11, 2023

    • Chen_et_al_2021_TSHR_functional

      Public
      R
      •
      MIT License
      •1•0•0•0•Updated May 17, 2021May 17, 2021

    • Population-analysis-with-pooled-data

      Public
      This repository contains scripts for analysing SNP data from pooled sequencing
      R
      •
      MIT License
      •1•0•0•0•Updated Dec 10, 2020Dec 10, 2020

    • eel_code_pub

      Public
      R
      •2•0•0•0•Updated Nov 27, 2020Nov 27, 2020

    • Rabbit_Domestication_Brain_RNA_Seq

      Public
      IN this repository you find codes for analysis of RNA-seq data generated from four brain parts published in ......
      R
      •2•0•0•0•Updated Sep 23, 2020Sep 23, 2020

    • Atlantic_herring_SDR

      Public
      This repository provides codes and analyses pipeline for discovery of Atlantic Herring sex chromosome
      R
      •2•0•0•0•Updated Aug 25, 2020Aug 25, 2020

    • rhodopsin

      Public
      analysis of rhodopsin locus in Atlantic herring
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Oct 16, 2019Oct 16, 2019

    • Rabbit-speciation

      Public
      Rabbit speciation analysis pipeline (Rafati et al. 2017)
      R
      •1•0•0•0•Updated Nov 29, 2017Nov 29, 2017