.travis.yml

dist: trusty
sudo: false
language: python
python:
  - "2.7"
  - "3.6"
git:
  # don't need the default depth of 50
  # but don't want to use a depth of 1 since that affects
  # whether jobs run when you have multiple commits queued
  # https://github.com/travis-ci/travis-ci/issues/4575
  depth: 10
cache:
  # cache pip files, also directory used for Ensembl downloads of GTF and FASTA files
  # along with the indexed db of intervals and ID mappings and pickles
  # of sequence dictionaries
  pip: true
before_install:
  - echo "TRAVIS_PYTHON_VERSION=$TRAVIS_PYTHON_VERSION"
  # download different versions of mini-conda for py2 vs. py3
  - |
    if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then
      wget https://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh;
    else
      wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
    fi
  - bash miniconda.sh -b -p $HOME/miniconda
  - export PATH="$HOME/miniconda/bin:$PATH"
  - hash -r
  - conda config --set always_yes yes --set changeps1 no
  - conda update -q conda
  # Useful for debugging any issues with conda
  - conda info -a
install:
- conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION nose pylint pandoc
- source activate test-environment
- pip install -r requirements.txt
- pip install .
- pip install pypandoc
- pip install coveralls
# command to run tests
script:
  - ./lint.sh
  - nosetests test --with-coverage --cover-package=datacache
after_success: coveralls
deploy:
  provider: pypi
  distributions: sdist
  user: openvax
  password: # See http://docs.travis-ci.com/user/encryption-keys/
    secure: "PMl+sLqvrf1Y3E2tWiyhSDITNnP4TXm6NgOZWArLlFCGe3sVqPzBcpd5n1ot6v+UeX7Cmt8HJzPmjv9DMupblyum2qo7D/bjIE3He0sAee+TxEfpn0qzBcJU16xoYROfzLianqMlJ/Jmiz+Vk61qGIjxvA//ZPeKbcgLbYD9IUg="
  on:
    branch: master
    condition: $TRAVIS_PYTHON_VERSION = "2.7"