From 9645f2b5aabe189fd06cddf576d672ca3bb3d9c9 Mon Sep 17 00:00:00 2001 From: Kai Waldrant Date: Thu, 11 Jul 2024 11:28:33 +0200 Subject: [PATCH] Fix paths in benchmark config --- src/workflows/run_benchmark/config.vsh.yaml | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/src/workflows/run_benchmark/config.vsh.yaml b/src/workflows/run_benchmark/config.vsh.yaml index e62a12b..f298617 100644 --- a/src/workflows/run_benchmark/config.vsh.yaml +++ b/src/workflows/run_benchmark/config.vsh.yaml @@ -5,17 +5,17 @@ argument_groups: - name: Inputs arguments: - name: "--input_train" - __merge__: /src/tasks/label_projection/api/file_train.yaml + __merge__: /src/api/file_train_h5ad.yaml type: file direction: input required: true - name: "--input_test" - __merge__: /src/tasks/label_projection/api/file_test.yaml + __merge__: /src/api/file_test_h5ad.yaml type: file direction: input required: true - name: "--input_solution" - __merge__: /src/tasks/label_projection/api/file_solution.yaml + __merge__: /src/api/file_solution.yaml type: file direction: input required: true @@ -59,7 +59,7 @@ resources: path: main.nf entrypoint: run_wf - type: file - path: "../_viash.yaml" + path: /_viash.yaml repositories: - name: openproblems-v2